RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 RAG2P55895 527 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 ARF6P62330 175 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 CDK5Q00535 292 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 PRDX4Q13162 271 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 STUMQ69YW2 141 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 DUX4L9Q6RFH8 374 aaPredicted RBP18.8■□□□□ 0.6
PTPN4-207ENST00000460162 FAM216BQ8N7L0 139 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 CCL13Q99616 98 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 DNTTIP1Q9H147 329 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 PPP1R3EQ9H7J1 279 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 YY1AP1Q9H869 796 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 CNTD2Q9H8S5 307 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 DUX4Q9UBX2 424 aa18.8■□□□□ 0.6
PTPN4-207ENST00000460162 WIPF1O43516 503 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 NDUFA7O95182 113 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 ANXA8P13928 327 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 SLC2A5P22732 501 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 OMGP23515 440 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 ACKR3P25106 362 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 LDLRAD3Q86YD5 345 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 CPOQ8IVL8 374 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 KIR3DL3Q8N743 410 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 LY6G5BQ8NDX9 201 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 OR8B12Q8NGG6 310 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 OR5P3Q8WZ94 311 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 PKP2Q99959 881 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 TEX12Q9BXU0 123 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 BEX1Q9HBH7 125 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 SLC25A19Q9HC21 320 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 TNFRSF19Q9NS68 423 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 KLHDC2Q9Y2U9 406 aa18.79■□□□□ 0.6
PTPN4-207ENST00000460162 NKX6-3A6NJ46 265 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 RPS7P62081 194 aaKnown RBP18.78■□□□□ 0.6
PTPN4-207ENST00000460162 DNAL1Q4LDG9 190 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 ATPAF1Q5TC12 328 aaPredicted RBP18.78■□□□□ 0.6
PTPN4-207ENST00000460162 HS3ST5Q8IZT8 346 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 FGFRL1Q8N441 504 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 SCCPDHQ8NBX0 429 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 TBC1D15Q8TC07 691 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 HPSE2Q8WWQ2 592 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 WFDC12Q8WWY7 111 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 HAO2Q9NYQ3 351 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 LRP12Q9Y561 859 aa18.78■□□□□ 0.6
PTPN4-207ENST00000460162 ZNF850A8MQ14 1090 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 NDUFB3O43676 98 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 KNG1P01042 644 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 ALOX5APP20292 161 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 ELF3P78545 371 aaPredicted RBP18.77■□□□□ 0.6
PTPN4-207ENST00000460162 FLOT2Q14254 428 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 LRRC10Q5BKY1 277 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 FAM76BQ5HYJ3 339 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 METAP1DQ6UB28 335 aaPredicted RBP18.77■□□□□ 0.6
PTPN4-207ENST00000460162 VMO1Q7Z5L0 202 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 KRT77Q7Z794 578 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 ZDHHC23Q8IYP9 409 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 CMTM4Q8IZR5 234 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 BBS1Q8NFJ9 593 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 DNAJC9Q8WXX5 260 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 DYRK2Q92630 601 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 ITFG2Q969R8 447 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 SEH1LQ96EE3 360 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 LYZL4Q96KX0 146 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 RAB3IPQ96QF0 476 aaPredicted RBP18.77■□□□□ 0.6
PTPN4-207ENST00000460162 C1RLQ9NZP8 487 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 ONECUT1Q9UBC0 465 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 DNAJB9Q9UBS3 223 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 DNAJB11Q9UBS4 358 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 LAMP5Q9UJQ1 280 aa18.77■□□□□ 0.6
PTPN4-207ENST00000460162 A0A0U1RQK1 487 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 AMY2BP19961 511 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 TGM4P49221 684 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 CBX1P83916 185 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 TREML4Q6UXN2 200 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 KCTD8Q6ZWB6 473 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 SPATA24Q86W54 205 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 C8orf46Q8TAG6 207 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 RPL3LQ92901 407 aaKnown RBP18.76■□□□□ 0.59
PTPN4-207ENST00000460162 DCTN5Q9BTE1 182 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 YIPF3Q9GZM5 350 aa18.76■□□□□ 0.59
PTPN4-207ENST00000460162 ZNF816-ZNF321PA0A0X1KG74 233 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 FKBP6O75344 327 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 DCTDP32321 178 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 RELBQ01201 579 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 GUCA2AQ02747 115 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 IKZF1Q13422 519 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 KCTD18Q6PI47 426 aaPredicted RBP18.75■□□□□ 0.59
PTPN4-207ENST00000460162 DEGS2Q6QHC5 323 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 C17orf107Q6ZR85 190 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 KRT74Q7RTS7 529 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 PAPD5Q8NDF8 572 aaKnown RBP18.75■□□□□ 0.59
PTPN4-207ENST00000460162 FAM81AQ8TBF8 368 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 PIGCQ92535 297 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 RNF170Q96K19 258 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 FGF23Q9GZV9 251 aaPredicted RBP18.75■□□□□ 0.59
PTPN4-207ENST00000460162 WDR13Q9H1Z4 485 aa18.75■□□□□ 0.59
PTPN4-207ENST00000460162 CAB39Q9Y376 341 aaPredicted RBP18.75■□□□□ 0.59
PTPN4-207ENST00000460162 A0A0U1RQV5 110 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 TCRBV3S1A0A5B6 114 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 ACOD1A6NK06 481 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 GYG2O15488 501 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms