RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 NDUFB11Q9NX14 153 aa13.25□□□□□ -0.29
SDF4-204ENST00000459994 PTTG3PQ9NZH4 202 aa13.25□□□□□ -0.29
SDF4-204ENST00000459994 SF3B6Q9Y3B4 125 aaKnown RBP13.25□□□□□ -0.29
SDF4-204ENST00000459994 PNMA8CA0A1B0GUJ8 204 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 hCG_38984A0A1B0GV85 526 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 LOC107986453A0A1B0GWG9 222 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 SYT7O43581 403 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 LMX1BO60663 402 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 MTRF1O75570 445 aaKnown RBP13.24□□□□□ -0.29
SDF4-204ENST00000459994 NAT2P11245 290 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 ZNF250P15622 560 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 ZNF12P17014 697 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 PSMA1P25786 263 aaKnown RBP13.24□□□□□ -0.29
SDF4-204ENST00000459994 GIFP27352 417 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 GABRA5P31644 462 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 RPS11P62280 158 aaKnown RBP eCLIP13.24□□□□□ -0.29
SDF4-204ENST00000459994 FAM3AP98173 230 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 SRSF2Q01130 221 aaKnown RBP13.24□□□□□ -0.29
SDF4-204ENST00000459994 RIN1Q13671 783 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 OR8B8Q15620 311 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 ODF4Q2M2E3 257 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 MBNL2Q5VZF2 373 aaKnown RBP13.24□□□□□ -0.29
SDF4-204ENST00000459994 PGAP1Q75T13 922 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 MRPL21Q7Z2W9 205 aaKnown RBP13.24□□□□□ -0.29
SDF4-204ENST00000459994 RDH10Q8IZV5 341 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 OR13F1Q8NGS4 319 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 KLF14Q8TD94 323 aaPredicted RBP13.24□□□□□ -0.29
SDF4-204ENST00000459994 GPR148Q8TDV2 347 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 UBASH3BQ8TF42 649 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 NEU4Q8WWR8 484 aaPredicted RBP13.24□□□□□ -0.29
SDF4-204ENST00000459994 RGP1Q92546 391 aaPredicted RBP13.24□□□□□ -0.29
SDF4-204ENST00000459994 YIPF5Q969M3 257 aa13.24□□□□□ -0.29
SDF4-204ENST00000459994 MYOZ1Q9NP98 299 aaPredicted RBP13.24□□□□□ -0.29
SDF4-204ENST00000459994 TRBV5-5A0A0J9YX44 114 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 LOC100289279A0A1B0GTE1 492 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 DHRS7CA6NNS2 312 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 M0R233 179 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 WNT9BO14905 357 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 DHRS3O75911 302 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 SELEP16581 610 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 GCH1P30793 250 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 DDOSTP39656 456 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 MAP2K3P46734 347 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 GSK3AP49840 483 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 HNRNPA0Q13151 305 aaKnown RBP13.23□□□□□ -0.29
SDF4-204ENST00000459994 GFOD2Q3B7J2 385 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 SPATA46Q5T0L3 261 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 KRT74Q7RTS7 529 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 COMMD2Q86X83 199 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 OR14K1Q8NGZ2 314 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 OR10AC1Q8NH08 325 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 THRSPQ92748 146 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 CMBLQ96DG6 245 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 TMEM160Q9NX00 188 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 DUSP13Q9UII6 198 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 V9GYS6 101 aa13.23□□□□□ -0.29
SDF4-204ENST00000459994 IGLV3-9A0A075B6K5 115 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 CD300LBA8K4G0 201 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 SERPINA3P01011 423 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 IGHV3-13P01766 116 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 HLA-DPB1P04440 258 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 KITLGP21583 273 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 GALP22466 123 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 TGFBR2P37173 567 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 MAGEB1P43366 347 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 EVX1P49640 407 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 GZMKP49863 264 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 RPS25P62851 125 aaKnown RBP13.22□□□□□ -0.29
SDF4-204ENST00000459994 PSG7Q13046 419 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 BLMHQ13867 455 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 HLXQ14774 488 aaPredicted RBP13.22□□□□□ -0.29
SDF4-204ENST00000459994 ZBTB37Q5TC79 503 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 CD200R1LQ6Q8B3 271 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 UNQ9370/PRO34162Q6UXP9 181 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 SYNPRQ8TBG9 265 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 TMIGD2Q96BF3 282 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 C10orf35Q96D05 121 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 YIPF6Q96EC8 236 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 FAM71F1Q96KD3 344 aaPredicted RBP13.22□□□□□ -0.29
SDF4-204ENST00000459994 TMED9Q9BVK6 235 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 ATRQ13535 2644 aa13.22□□□□□ -0.29
SDF4-204ENST00000459994 MXRA5Q9NR99 2828 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 GGT3PA6NGU5 568 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 IQCF6A8MYZ5 107 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 SC5DO75845 299 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 GATBO75879 557 aaKnown RBP13.21□□□□□ -0.29
SDF4-204ENST00000459994 TGFAP01135 160 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 FAM157CP0CG43 387 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 CD36P16671 472 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 RBMXP38159 391 aaKnown RBP13.21□□□□□ -0.29
SDF4-204ENST00000459994 MPV17P39210 176 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 SELENOVP59797 346 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 RIPPLY1Q0D2K3 151 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 Q499Y3 187 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 FAM120AOSQ5T036 256 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 FAM166AQ6J272 317 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 GPR141Q7Z602 305 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 CSNK2A3Q8NEV1 391 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 SEMA6DQ8NFY4 1073 aa13.21□□□□□ -0.29
SDF4-204ENST00000459994 PHYHIPQ92561 330 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms