RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 A0A0B4J203 849 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 TRAV1-2A0A0B4J238 106 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 GGT3PA6NGU5 568 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF850A8MQ14 1090 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 J3QW42 95 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 CASKO14936 926 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 GMDSO60547 372 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 SLC2A2P11168 524 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-205ENST00000454569 MYL9P24844 172 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 RIPPLY1Q0D2K3 151 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 ADIPOQQ15848 244 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 SPRNQ5BIV9 151 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 TMEM42Q69YG0 159 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 RGS7BPQ6MZT1 257 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-205ENST00000454569 LYPD6Q86Y78 171 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 SERPINA12Q8IW75 414 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 OR1M1Q8NGA1 313 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 OR52N4Q8NGI2 321 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 OR5L1Q8NGL2 311 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 UBASH3BQ8TF42 649 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 TMEM204Q9BSN7 226 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 ZCCHC4Q9H5U6 513 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 ESRP2Q9H6T0 727 aaKnown RBP9.38□□□□□ -0.91
SCN9A-205ENST00000454569 MOV10Q9HCE1 1003 aaKnown RBP9.38□□□□□ -0.91
SCN9A-205ENST00000454569 PLEKHB1Q9UF11 243 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-205ENST00000454569 CGGBP1Q9UFW8 167 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-205ENST00000454569 DUSP13Q9UII6 198 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 PURGQ9UJV8 347 aaKnown RBP9.38□□□□□ -0.91
SCN9A-205ENST00000454569 TACC2O95359 2948 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 CELSR2Q9HCU4 2923 aa9.38□□□□□ -0.91
SCN9A-205ENST00000454569 IGKV1-27A0A075B6S5 117 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 IQCF6A8MYZ5 107 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 PRSS44E7EML9 344 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MTRF1O75570 445 aaKnown RBP9.37□□□□□ -0.91
SCN9A-205ENST00000454569 RAF1P04049 648 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 CD3EP07766 207 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 RAC2P15153 192 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF250P15622 560 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF20P17024 532 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 FSTP19883 344 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 CA6P23280 308 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 COL8A1P27658 744 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MTNR1BP49286 362 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 RORCP51449 518 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF718Q3SXZ3 478 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 BEX5Q5H9J7 111 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MBNL2Q5VZF2 373 aaKnown RBP9.37□□□□□ -0.91
SCN9A-205ENST00000454569 PAMR1Q6UXH9 720 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MEX3BQ6ZN04 569 aaKnown RBP9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MOB3CQ70IA8 216 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 NUP37Q8NFH4 326 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 TRMT10AQ8TBZ6 339 aaKnown RBP9.37□□□□□ -0.91
SCN9A-205ENST00000454569 HPSE2Q8WWQ2 592 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 PIGTQ969N2 578 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 GSX2Q9BZM3 304 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 CHST5Q9GZS9 411 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 C6orf62Q9GZU0 229 aaPredicted RBP9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MMP27Q9H306 513 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MSL2Q9HCI7 577 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 CA10Q9NS85 328 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF391Q9UJN7 358 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 A3GALT2U3KPV4 340 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 DYSFO75923 2080 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 CENPEQ02224 2701 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 IGHV3-64DA0A0J9YX35 117 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF816-ZNF321PA0A0X1KG74 233 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MLNRO43193 412 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 ARL6IP5O75915 188 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 NRASP01111 189 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 CD2P06729 351 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 CD37P11049 281 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 SELEP16581 610 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 ATF1P18846 271 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 RAB3BP20337 219 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 KITLGP21583 273 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MAPK3P27361 379 aaPredicted RBP9.37□□□□□ -0.91
SCN9A-205ENST00000454569 THBS2P35442 1172 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 MMP15P51511 669 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 TNP2Q05952 138 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 PRDX4Q13162 271 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 LINC00299Q6ZSB3 139 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 KRT74Q7RTS7 529 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 OR5D14Q8NGL3 314 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 SYNPRQ8TBG9 265 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 ZFAND2BQ8WV99 257 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 PHYHIPQ92561 330 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 RFT1Q96AA3 541 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 SLC25A46Q96AG3 418 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 NXF2Q9GZY0 626 aaKnown RBP9.37□□□□□ -0.91
SCN9A-205ENST00000454569 KCNK15Q9H427 330 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 PLEKHA1Q9HB21 404 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 TCF7L1Q9HCS4 588 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 NGBQ9NPG2 151 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 FOXJ3Q9UPW0 622 aa9.37□□□□□ -0.91
SCN9A-205ENST00000454569 FASNP49327 2511 aaKnown RBP9.36□□□□□ -0.91
SCN9A-205ENST00000454569 NBPF19A0A087WUL8 3843 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 IGLV3-9A0A075B6K5 115 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 DHRS7CA6NNS2 312 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 SULT1B1O43704 296 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 CST4P01036 141 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms