RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PMS2P2O95744 297 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 ATP1B3P54709 279 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 GK2Q14410 553 aaPredicted RBP10.55□□□□□ -0.72
SMPD4-213ENST00000454468 C21orf62-AS1Q17RA5 79 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 PLCXD3Q63HM9 321 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 DOK3Q7L591 496 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 SLC25A21Q9BQT8 299 aaPredicted RBP10.55□□□□□ -0.72
SMPD4-213ENST00000454468 B3GNT2Q9NY97 397 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 U3KQA8 63 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 DIDO1Q9BTC0 2240 aaKnown RBP10.55□□□□□ -0.72
SMPD4-213ENST00000454468 DOCK10Q96BY6 2186 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 AQP7P3A6NL99 342 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 COX6A1P12074 109 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 EDN3P14138 238 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 LIFP15018 202 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 ZNF32P17041 273 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 MEF2DQ14814 521 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 ABCA11PQ4W5N1 156 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 SEZ6L2Q6UXD5 910 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 OR10D3Q8NH80 312 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 CT55Q8WUE5 264 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 CDC6Q99741 560 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 PARP12Q9H0J9 701 aaKnown RBP10.55□□□□□ -0.72
SMPD4-213ENST00000454468 VSIG4Q9Y279 399 aa10.55□□□□□ -0.72
SMPD4-213ENST00000454468 MED13Q9UHV7 2174 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 IGLV3-12A0A075B6K2 115 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 SNRPGP15A8MWD9 76 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 SERPINF1P36955 418 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 RAG2P55895 527 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 HLXQ14774 488 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-213ENST00000454468 COL19A1Q14993 1142 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 PRR18Q8N4B5 295 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 TRAF4Q9BUZ4 470 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-213ENST00000454468 PAPOLGQ9BWT3 736 aaKnown RBP10.54□□□□□ -0.72
SMPD4-213ENST00000454468 SRXN1Q9BYN0 137 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 DEFB127Q9H1M4 99 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 NOSIPQ9Y314 301 aaKnown RBP10.54□□□□□ -0.72
SMPD4-213ENST00000454468 ADAMTS9Q9P2N4 1935 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 A0A1W2PR80 420 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 HSPB2A8KAH6 182 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 GLRA1P23415 457 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 PTGDSP41222 190 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 HSPB2Q16082 182 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 ZNF100Q8IYN0 542 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 OR56B1Q8NGI3 324 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 ZNF75AQ96N20 296 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 NELFAQ9H3P2 528 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 EDARQ9UNE0 448 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 C14orf166Q9Y224 244 aaKnown RBP10.54□□□□□ -0.72
SMPD4-213ENST00000454468 LSM5Q9Y4Y9 91 aaKnown RBP10.54□□□□□ -0.72
SMPD4-213ENST00000454468 WDFY3Q8IZQ1 3526 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 DMDP11532 3685 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 TOR1AO14656 332 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 GRB2P62993 217 aaKnown RBP10.54□□□□□ -0.72
SMPD4-213ENST00000454468 ZP4Q12836 540 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 SP6Q3SY56 376 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 PHLDA2Q53GA4 152 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 FAM209BQ5JX69 171 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 MRPL14Q6P1L8 145 aaKnown RBP10.54□□□□□ -0.72
SMPD4-213ENST00000454468 DEGS2Q6QHC5 323 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 PDZD9Q8IXQ8 264 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 TMEM229BQ8NBD8 167 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 C12orf57Q99622 126 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 FAAP24Q9BTP7 215 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 PPA2Q9H2U2 334 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 MBD2Q9UBB5 411 aa10.54□□□□□ -0.72
SMPD4-213ENST00000454468 RBM7Q9Y580 266 aaKnown RBP10.54□□□□□ -0.72
SMPD4-213ENST00000454468 SSX5O60225 188 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 CDC14BO60729 498 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 KLF7O75840 302 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-213ENST00000454468 HLA-HP01893 362 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 ZNF806P0C7X5 589 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 RBMXP38159 391 aaKnown RBP10.53□□□□□ -0.72
SMPD4-213ENST00000454468 SNAI3Q3KNW1 292 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 CPNE2Q96FN4 548 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-213ENST00000454468 REEP6Q96HR9 211 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 GPR137Q96N19 417 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 ASF1BQ9NVP2 202 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 PIPOXQ9P0Z9 390 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 MEX3AA1L020 520 aaKnown RBP10.53□□□□□ -0.72
SMPD4-213ENST00000454468 OR14I1A6ND48 311 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 IL5P05113 134 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 PTGFRP43088 359 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 MICBQ29980 383 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 KIAA2026Q5HYC2 2103 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 ATP1A1-AS1Q5TC04 95 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 SHEQ5VZ18 495 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 MEX3BQ6ZN04 569 aaKnown RBP10.53□□□□□ -0.72
SMPD4-213ENST00000454468 GTPBP8Q8N3Z3 284 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-213ENST00000454468 SEMA6DQ8NFY4 1073 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 CADP27708 2225 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 TMEM131Q92545 1883 aa10.53□□□□□ -0.72
SMPD4-213ENST00000454468 GJE1A6NN92 205 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 E9PLN8 166 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 BPNT1O95861 308 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 HAAOP46952 286 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 ZNF600Q6ZNG1 722 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 PGAP1Q75T13 922 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 LHFPL5Q8TAF8 219 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 PAQR8Q8TEZ7 354 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms