RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 OR2G2Q8NGZ5 317 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 OR5P3Q8WZ94 311 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 TFAP2CQ92754 450 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 ITFG2Q969R8 447 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 ITPKCQ96DU7 683 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 RNF170Q96K19 258 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 RTL8AQ9BWD3 113 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 VCX3BQ9H321 246 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 ERVK13-1Q9NX77 482 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 ENPP5Q9UJA9 477 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 KCNS2Q9ULS6 477 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 HSPE1-MOB4S4R3N1 261 aa13.21□□□□□ -0.29
TOP3B-211ENST00000449704 FN1P02751 2386 aaKnown RBP13.21□□□□□ -0.3
TOP3B-211ENST00000449704 PPIAL4EA0A075B759 164 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 A6NIN4 97 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 PPIAL4DF5H284 164 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 SYT7O43581 403 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 IGHV2-5P01817 119 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 HTR1AP08908 422 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 PPIAL4FP0DN26 164 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 THBS2P35442 1172 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 KIR3DL2P43630 455 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 CSNK2BP67870 215 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 TMEM155Q4W5P6 130 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 DMRTC1Q5HYR2 192 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 CEP78Q5JTW2 689 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 WDR86Q86TI4 376 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 RDH10Q8IZV5 341 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 KLHL36Q8N4N3 616 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 DEFB108BQ8NET1 73 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 OR14K1Q8NGZ2 314 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 RNF166Q96A37 237 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-211ENST00000449704 PELI1Q96FA3 418 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 C1orf159Q96HA4 380 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 ISG20L2Q9H9L3 353 aaKnown RBP13.2□□□□□ -0.3
TOP3B-211ENST00000449704 TMEM165Q9HC07 324 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 FGF20Q9NP95 211 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-211ENST00000449704 PPIAL4AQ9Y536 164 aa13.2□□□□□ -0.3
TOP3B-211ENST00000449704 NIPBLQ6KC79 2804 aaeCLIP13.2□□□□□ -0.3
TOP3B-211ENST00000449704 NSD1Q96L73 2696 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-211ENST00000449704 IRGMA1A4Y4 181 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 NRASP01111 189 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 DCKP27707 260 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 HOXA4Q00056 320 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-211ENST00000449704 ZNF154Q13106 437 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 ZBTB37Q5TC79 503 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 PLCXD3Q63HM9 321 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 SYS1Q8N2H4 156 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 MUC20Q8N307 709 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-211ENST00000449704 HPSE2Q8WWQ2 592 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 METTL17Q9H7H0 456 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-211ENST00000449704 GPR173Q9NS66 373 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 FRRS1LQ9P0K9 344 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 V9GYS6 101 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 DYSFO75923 2080 aa13.19□□□□□ -0.3
TOP3B-211ENST00000449704 LOC107986453A0A1B0GWG9 222 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 ZNF732B4DXR9 585 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 C3orf80F5H4A9 247 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 H0YJX3 145 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 CDIPTO14735 213 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 ATP6V1G2O95670 118 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 MSMBP08118 114 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 UBCP0CG48 685 aaKnown RBP13.18□□□□□ -0.3
TOP3B-211ENST00000449704 LIMS3P0CW19 117 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 LIMS4P0CW20 117 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 CCL1P22362 96 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 CD80P33681 288 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 GPM6AP51674 278 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 NANOS3P60323 173 aaKnown RBP13.18□□□□□ -0.3
TOP3B-211ENST00000449704 CEACAM21Q3KPI0 293 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 CLVS2Q5SYC1 327 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 SFRP4Q6FHJ7 346 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-211ENST00000449704 FDX2Q6P4F2 183 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 C11orf53Q8IXP5 236 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 BPIFB6Q8NFQ5 453 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 OR51F2Q8NH61 342 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 LRRC29Q8WV35 223 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 GGHQ92820 318 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 RPL3LQ92901 407 aaKnown RBP13.18□□□□□ -0.3
TOP3B-211ENST00000449704 TMEM246Q9BRR3 403 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 ZNF649Q9BS31 505 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 FGF23Q9GZV9 251 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-211ENST00000449704 PLEKHA1Q9HB21 404 aa13.18□□□□□ -0.3
TOP3B-211ENST00000449704 PATZ1Q9HBE1 687 aaKnown RBP13.18□□□□□ -0.3
TOP3B-211ENST00000449704 CHCHD3Q9NX63 227 aaKnown RBP13.18□□□□□ -0.3
TOP3B-211ENST00000449704 EFCAB10A6NFE3 127 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 TMEM210A6NLX4 147 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 DHRS7CA6NNS2 312 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 CEACAM18A8MTB9 384 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 LGALS8O00214 317 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 PLPP2O43688 288 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 XPNPEP2O43895 674 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 MYL12AP19105 171 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 ETV1P50549 477 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 CCR9P51686 369 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 GBX2P52951 348 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-211ENST00000449704 GNG3P63215 75 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 RIPK1Q13546 671 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 ALKBH1Q13686 389 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms