RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 RTL8AQ9BWD3 113 aa11.32□□□□□ -0.6
TOM1-211ENST00000449508 CHIAQ9BZP6 476 aa11.32□□□□□ -0.6
TOM1-211ENST00000449508 BEX1Q9HBH7 125 aa11.32□□□□□ -0.6
TOM1-211ENST00000449508 DUX4Q9UBX2 424 aa11.32□□□□□ -0.6
TOM1-211ENST00000449508 MMP24Q9Y5R2 645 aa11.32□□□□□ -0.6
TOM1-211ENST00000449508 TRRAPQ9Y4A5 3859 aa11.32□□□□□ -0.6
TOM1-211ENST00000449508 A0A1B0GUS0 222 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.31□□□□□ -0.6
TOM1-211ENST00000449508 ANXA8P13928 327 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 HOXB6P17509 224 aaKnown RBP11.31□□□□□ -0.6
TOM1-211ENST00000449508 ACKR3P25106 362 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 HCCSP53701 268 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 IKZF1Q13422 519 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 CDONQ4KMG0 1287 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 SLC35D3Q5M8T2 416 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 TMEM236Q5W0B7 351 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 KRT77Q7Z794 578 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 SPATA24Q86W54 205 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 TMEM86BQ8N661 226 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 KIR3DL3Q8N743 410 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 OR4F5Q8NH21 305 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 SSMEM1Q8WWF3 244 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 OR5P3Q8WZ94 311 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 RPL3LQ92901 407 aaKnown RBP11.31□□□□□ -0.6
TOM1-211ENST00000449508 C12orf43Q96C57 262 aaKnown RBP11.31□□□□□ -0.6
TOM1-211ENST00000449508 RNF170Q96K19 258 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 HIST1H2AAQ96QV6 131 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 TEX12Q9BXU0 123 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 TLNRD1Q9H1K6 362 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 NIPAL2Q9H841 368 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 YY1AP1Q9H869 796 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 SNTG1Q9NSN8 517 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 HAO2Q9NYQ3 351 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 ONECUT1Q9UBC0 465 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 DNAJB11Q9UBS4 358 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 LAMP5Q9UJQ1 280 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 KPTNQ9Y664 436 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 POMT1Q9Y6A1 747 aa11.31□□□□□ -0.6
TOM1-211ENST00000449508 A0A1B0GVI7 797 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 TMEM210A6NLX4 147 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 GPR37O15354 613 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 AKR7A2O43488 359 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 WIPF1O43516 503 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 CST4P01036 141 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 KNG1P01042 644 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 AMY2BP19961 511 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 ALOX5APP20292 161 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 TGM4P49221 684 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 RAG2P55895 527 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 CBX1P83916 185 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 FLOT2Q14254 428 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 LRRC10Q5BKY1 277 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 ATPAF1Q5TC12 328 aaPredicted RBP11.3□□□□□ -0.6
TOM1-211ENST00000449508 VMO1Q7Z5L0 202 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 LY6G5BQ8NDX9 201 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 BBS1Q8NFJ9 593 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 OR8B12Q8NGG6 310 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 OR10Z1Q8NGY1 313 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 LYZL4Q96KX0 146 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 PKP2Q99959 881 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 WDR13Q9H1Z4 485 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 ABCB9Q9NP78 766 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 ZNF391Q9UJN7 358 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 KLHDC2Q9Y2U9 406 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 LRP12Q9Y561 859 aa11.3□□□□□ -0.6
TOM1-211ENST00000449508 A0A0U1RQK1 487 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 GYG2O15488 501 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 MAP2K3P46734 347 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 PSMA6P60900 246 aaKnown RBP11.29□□□□□ -0.6
TOM1-211ENST00000449508 RELBQ01201 579 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 APOFQ13790 326 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 SNAPC1Q16533 368 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 FAM76BQ5HYJ3 339 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 STUMQ69YW2 141 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
TOM1-211ENST00000449508 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 C17orf107Q6ZR85 190 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 ZDHHC23Q8IYP9 409 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 CMTM4Q8IZR5 234 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 FAM81AQ8TBF8 368 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 H1FXQ92522 213 aaKnown RBP11.29□□□□□ -0.6
TOM1-211ENST00000449508 DYRK2Q92630 601 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 MED30Q96HR3 178 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 DMRTB1Q96MA1 342 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 TEAD3Q99594 435 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 YIPF3Q9GZM5 350 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 TVP23BQ9NYZ1 205 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 DNAJB9Q9UBS3 223 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 FAM96BQ9Y3D0 163 aa11.29□□□□□ -0.6
TOM1-211ENST00000449508 PSMD9O00233 223 aa11.28□□□□□ -0.6
TOM1-211ENST00000449508 FKBP6O75344 327 aa11.28□□□□□ -0.6
TOM1-211ENST00000449508 IGHV4-59P01825 116 aa11.28□□□□□ -0.6
TOM1-211ENST00000449508 SLC2A5P22732 501 aa11.28□□□□□ -0.6
TOM1-211ENST00000449508 IER3P46695 156 aa11.28□□□□□ -0.6
TOM1-211ENST00000449508 GPM6AP51674 278 aa11.28□□□□□ -0.6
TOM1-211ENST00000449508 CRISP1P54107 249 aa11.28□□□□□ -0.6
TOM1-211ENST00000449508 SRSF4Q08170 494 aaKnown RBP11.28□□□□□ -0.6
TOM1-211ENST00000449508 DNAL1Q4LDG9 190 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms