RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 VCXQ9H320 206 aa12.22□□□□□ -0.45
USP39-206ENST00000448971 ACOXLQ9NUZ1 547 aa12.22□□□□□ -0.45
USP39-206ENST00000448971 HIF1ANQ9NWT6 349 aa12.22□□□□□ -0.45
USP39-206ENST00000448971 RNF7Q9UBF6 113 aa12.22□□□□□ -0.45
USP39-206ENST00000448971 PPIAL4AQ9Y536 164 aa12.22□□□□□ -0.45
USP39-206ENST00000448971 TRAV20A0A0B4J274 112 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 SLC16A6O15403 523 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 MTRF1O75570 445 aaKnown RBP12.21□□□□□ -0.45
USP39-206ENST00000448971 SULT1C4O75897 302 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 DHRS3O75911 302 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 PTBP3O95758 552 aaKnown RBP12.21□□□□□ -0.45
USP39-206ENST00000448971 ATP6V1B1P15313 513 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 GABRB1P18505 474 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 CFPP27918 469 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 CD80P33681 288 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 CSNK2BP67870 215 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 LCN2P80188 198 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 ESCO2Q56NI9 601 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 ZNF826PQ6ZT77 177 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 WDR86Q86TI4 376 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 LRRC28Q86X40 367 aaPredicted RBP12.21□□□□□ -0.45
USP39-206ENST00000448971 ELMOD2Q8IZ81 293 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 C19orf18Q8NEA5 215 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 PPP1R14AQ96A00 147 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 ITPKCQ96DU7 683 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 HIST1H2AAQ96QV6 131 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 PPP1R3EQ9H7J1 279 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 PLEKHA1Q9HB21 404 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 PATZ1Q9HBE1 687 aaKnown RBP12.21□□□□□ -0.45
USP39-206ENST00000448971 G6PC2Q9NQR9 355 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 ENPP5Q9UJA9 477 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 PIGLQ9Y2B2 252 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 PCDHGB1Q9Y5G3 927 aa12.21□□□□□ -0.45
USP39-206ENST00000448971 MEGF8Q7Z7M0 2845 aa12.21□□□□□ -0.46
USP39-206ENST00000448971 PKD1L1Q8TDX9 2849 aa12.21□□□□□ -0.46
USP39-206ENST00000448971 A0A0G2JMP0 313 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 A0A0X1KG70 313 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 A0A1B0GVI7 797 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 P2RY10O00398 339 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 PLPP2O43688 288 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 FOXH1O75593 365 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 CLIC3O95833 236 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 CST4P01036 141 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 IGLV3-1P01715 115 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 FAHP16930 419 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 SEC61A1P61619 476 aaKnown RBP12.2□□□□□ -0.46
USP39-206ENST00000448971 ACTA2P62736 377 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 ACTG2P63267 376 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 ELF3P78545 371 aaPredicted RBP12.2□□□□□ -0.46
USP39-206ENST00000448971 RIPPLY1Q0D2K3 151 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 ZNF154Q13106 437 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 ZNF404Q494X3 552 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 TTC23Q5W5X9 447 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 PLCXD3Q63HM9 321 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 NLRC3Q7RTR2 1065 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 ACBD7Q8N6N7 88 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.2□□□□□ -0.46
USP39-206ENST00000448971 SETD9Q8NE22 299 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 DEFB108BQ8NET1 73 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 OR1M1Q8NGA1 313 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 OR4M2Q8NGB6 313 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 RHOXF1Q8NHV9 184 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 LRRC29Q8WV35 223 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 HPSE2Q8WWQ2 592 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 LGALS12Q96DT0 336 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 MRPL48Q96GC5 212 aaKnown RBP12.2□□□□□ -0.46
USP39-206ENST00000448971 AMBNQ9NP70 447 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 SLC22A13Q9Y226 551 aa12.2□□□□□ -0.46
USP39-206ENST00000448971 TMEM210A6NLX4 147 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 H3BSH0 61 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 DLGAP1O14490 977 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 CASQ2O14958 399 aaPredicted RBP12.19□□□□□ -0.46
USP39-206ENST00000448971 FADS2O95864 444 aaKnown RBP12.19□□□□□ -0.46
USP39-206ENST00000448971 SRP14P37108 136 aaKnown RBP12.19□□□□□ -0.46
USP39-206ENST00000448971 PSMB10P40306 273 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
USP39-206ENST00000448971 KCNJ8Q15842 424 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 WDR38Q5JTN6 314 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 CEP78Q5JTW2 689 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 ZNF684Q5T5D7 378 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 OGFRL1Q5TC84 451 aaPredicted RBP12.19□□□□□ -0.46
USP39-206ENST00000448971 ZNF691Q5VV52 312 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 DCAF12L2Q5VW00 463 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 SFRP4Q6FHJ7 346 aaPredicted RBP12.19□□□□□ -0.46
USP39-206ENST00000448971 FAHD2BQ6P2I3 314 aaPredicted RBP12.19□□□□□ -0.46
USP39-206ENST00000448971 DOK3Q7L591 496 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 CATSPERDQ86XM0 798 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 DHRSXQ8N5I4 330 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 OR8B3Q8NGG8 313 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 APH1BQ8WW43 257 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 OR5P3Q8WZ94 311 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 RORBQ92753 470 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 FAHD2AQ96GK7 314 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 RNF170Q96K19 258 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 OR8B2Q96RD0 313 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 MYCBPQ99417 103 aaPredicted RBP12.19□□□□□ -0.46
USP39-206ENST00000448971 TMEM246Q9BRR3 403 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 ADI1Q9BV57 179 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 ALG8Q9BVK2 526 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 DCLRE1BQ9H816 532 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms