RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TEX47Q8TBZ9 253 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 H1FXQ92522 213 aaKnown RBP11.34□□□□□ -0.59
PTPRE-203ENST00000442830 SGK3Q96BR1 496 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 ITPKCQ96DU7 683 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 RAB3IPQ96QF0 476 aaPredicted RBP11.34□□□□□ -0.59
PTPRE-203ENST00000442830 HIST1H2AAQ96QV6 131 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 ABHD6Q9BV23 337 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 REEP1Q9H902 201 aa11.34□□□□□ -0.59
PTPRE-203ENST00000442830 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
PTPRE-203ENST00000442830 PRKDCP78527 4128 aaKnown RBP11.33□□□□□ -0.6
PTPRE-203ENST00000442830 ACOT8O14734 319 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 CDIPTO14735 213 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 SIGLEC5O15389 551 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 DCTN3O75935 186 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 GLCEO94923 617 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 CST4P01036 141 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 GYPBP06028 91 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 CSF1P09603 554 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 OPRL1P41146 370 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 CSNK2BP67870 215 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 HOXA4Q00056 320 aaPredicted RBP11.33□□□□□ -0.6
PTPRE-203ENST00000442830 IKZF1Q13422 519 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 FAM98BQ52LJ0 330 aaKnown RBP11.33□□□□□ -0.6
PTPRE-203ENST00000442830 FAM76BQ5HYJ3 339 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 LINC01590Q5TEZ4 76 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 LYPD4Q6UWN0 246 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 ZNF788Q6ZQV5 615 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 Q6ZTK2 550 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 WDR86Q86TI4 376 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 TIGD4Q8IY51 512 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 FAM216BQ8N7L0 139 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 ZNRF4Q8WWF5 429 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 PKP2Q99959 881 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 RANBP3Q9H6Z4 567 aaPredicted RBP11.33□□□□□ -0.6
PTPRE-203ENST00000442830 SIRT7Q9NRC8 400 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 ZNF446Q9NWS9 450 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 FBLN5Q9UBX5 448 aa11.33□□□□□ -0.6
PTPRE-203ENST00000442830 SF3B6Q9Y3B4 125 aaKnown RBP11.33□□□□□ -0.6
PTPRE-203ENST00000442830 SAMHD1Q9Y3Z3 626 aaKnown RBP11.33□□□□□ -0.6
PTPRE-203ENST00000442830 hCG_1809904A0A1W2PP81 198 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 A0A1W2PQ09 198 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 A0A1W2PR64 198 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 A0A1W2PRV1 198 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 MEIOCA2RUB1 952 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 ARRDC5A6NEK1 342 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 ACOD1A6NK06 481 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.32□□□□□ -0.6
PTPRE-203ENST00000442830 FCN3O75636 299 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 LYNP07948 512 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 PSKH1P11801 424 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 ATP6V1B1P15313 513 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 GABRA5P31644 462 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 SAA4P35542 130 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 DBPQ10586 325 aaPredicted RBP11.32□□□□□ -0.6
PTPRE-203ENST00000442830 POU4F2Q12837 409 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 PRDX4Q13162 271 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 HERPUD1Q15011 391 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 GFOD2Q3B7J2 385 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 OR2T5Q6IEZ7 315 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 KCTD8Q6ZWB6 473 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 PDZD9Q8IXQ8 264 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 ZDHHC23Q8IYP9 409 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 DEFB107AQ8IZN7 70 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 BEND2Q8NDZ0 799 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 OR2T29Q8NH02 315 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 OR4Q3Q8NH05 313 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 OR5P3Q8WZ94 311 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 TEX12Q9BXU0 123 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 ARMC1Q9NVT9 282 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 DNAJC27Q9NZQ0 273 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 RHBDD3Q9Y3P4 386 aa11.32□□□□□ -0.6
PTPRE-203ENST00000442830 ZNF816-ZNF321PA0A0X1KG74 233 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 PRODHO43272 600 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 SOX14O95416 240 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 ACAA1P09110 424 aaPredicted RBP11.31□□□□□ -0.6
PTPRE-203ENST00000442830 POU1F1P28069 291 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 MAP2K3P46734 347 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 KRTAP10-3P60369 221 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 PSMA6P60900 246 aaKnown RBP11.31□□□□□ -0.6
PTPRE-203ENST00000442830 GNG3P63215 75 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 KLHL12Q53G59 568 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 Q8N7P7 452 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 OR4C13Q8NGP0 309 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 OTOSQ8NHW6 89 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 ANGPTL6Q8NI99 470 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 ZNF671Q8TAW3 534 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 FAM81AQ8TBF8 368 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 RNF170Q96K19 258 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 GAFA1Q96PS6 74 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 FAM107BQ9H098 131 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 RASL12Q9NYN1 266 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 NLKQ9UBE8 527 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 ARL2BPQ9Y2Y0 163 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 LRP12Q9Y561 859 aa11.31□□□□□ -0.6
PTPRE-203ENST00000442830 OR5B21A6NL26 309 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 OR2AT4A6NND4 320 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 ZNF850A8MQ14 1090 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 PRR23D1E9PI22 279 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms