RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 RAB3CQ96E17 227 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 MESP1Q9BRJ9 268 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 CNTD2Q9H8S5 307 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 MRPL22Q9NWU5 206 aaKnown RBP7.59□□□□□ -1.19
HPS4-206ENST00000439453 GPR132Q9UNW8 380 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 STARD10Q9Y365 291 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 LRP12Q9Y561 859 aa7.59□□□□□ -1.19
HPS4-206ENST00000439453 LOC107986453A0A1B0GWG9 222 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 XKRYO14609 159 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 IFNA17P01571 189 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 HKR1P10072 659 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 NPY4RP50391 375 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 Q3ZCU0 254 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 RTN4RL2Q86UN3 420 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 PPP1R3BQ86XI6 285 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 NKAIN3Q8N8D7 197 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 TAAR8Q969N4 342 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 ZFYVE21Q9BQ24 234 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 ADAM19Q9H013 955 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 GSKIPQ9P0R6 139 aa7.59□□□□□ -1.2
HPS4-206ENST00000439453 TSPAN15O95858 294 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 PNLIPP16233 465 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 SULT1A1P50225 295 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 CEBPGP53567 150 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 MARCH3Q86UD3 253 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 OR10G6Q8NH81 332 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 SGK3Q96BR1 496 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 MAP3K3Q99759 626 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 CCDC3Q9BQI4 270 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 ABHD6Q9BV23 337 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 NRSN2Q9GZP1 204 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 RAB33BQ9H082 229 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 OPA3Q9H6K4 179 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 EMC9Q9Y3B6 208 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 ITPR1Q14643 2758 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 A0A1W2PPE2 198 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 C11orf98E9PRG8 122 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 ST8SIA5O15466 376 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 YIF1AO95070 293 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 IFNA2P01563 188 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 HOXB5P09067 269 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 CT45A8P0DMV1 189 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 CT45A9P0DMV2 189 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 GLB1P16278 677 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 PI3P19957 117 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 HOXA5P20719 270 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 RAB38P57729 211 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 IL15RAQ13261 267 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 CT45A2Q5DJT8 189 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 PYY3Q5JQD4 70 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 ZNF574Q6ZN55 896 aaPredicted RBP7.58□□□□□ -1.2
HPS4-206ENST00000439453 MAMDC2Q7Z304 686 aaPredicted RBP7.58□□□□□ -1.2
HPS4-206ENST00000439453 FOXRED2Q8IWF2 684 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 DNAJA3Q96EY1 480 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 PARP12Q9H0J9 701 aaKnown RBP7.58□□□□□ -1.2
HPS4-206ENST00000439453 CEP295Q9C0D2 2601 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 ZNF264O43296 627 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 SLC16A7O60669 478 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 PVRP15151 417 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 SNCAP37840 140 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 SUPT4H1P63272 117 aaKnown RBP7.58□□□□□ -1.2
HPS4-206ENST00000439453 QRFPP83859 136 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 CD226Q15762 336 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 GUK1Q16774 197 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 NSUN5P2Q63ZY6 315 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 C1QL4Q86Z23 238 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 ZNF565Q8N9K5 539 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 ZNF383Q8NA42 475 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 MAFIPQ8WZ33 124 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 STARD5Q9NSY2 213 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 UFSP2Q9NUQ7 469 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 R4GMQ9 66 aa7.58□□□□□ -1.2
HPS4-206ENST00000439453 ATMQ13315 3056 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 KMT2BQ9UMN6 2715 aaPredicted RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 C2orf74A8MZ97 194 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 GPR37O15354 613 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 SRSF10O75494 262 aaKnown RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 RNF224P0DH78 156 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 CCL7P80098 99 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 RHEBQ15382 184 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 ZNF239Q16600 458 aaKnown RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 MIDNQ504T8 468 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 OR2A2Q6IF42 318 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 CBLN3Q6UW01 205 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 KDM8Q8N371 416 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 OR9K2Q8NGE7 335 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 OR56B1Q8NGI3 324 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 ZNF524Q96C55 264 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 SCRT1Q9BWW7 348 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 AMDHD2Q9Y303 409 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 PRSS37A4D1T9 235 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 UMAD1C9J7I0 102 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 BPNT1O95861 308 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 VSIG8P0DPA2 414 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 SELLP14151 372 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 HES3Q5TGS1 186 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 COMMD1Q8N668 190 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 OR1J1Q8NGS3 322 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 AKR7LQ8NHP1 331 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms