RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 C4orf47A7E2U8 309 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 XRCC2O43543 280 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 H2AFB1P0C5Y9 115 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 BTCP35070 178 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 TAGLN2P37802 199 aaKnown RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 PTGFRP43088 359 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 GSK3AP49840 483 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 MMP16P51512 607 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 H2BFSP57053 126 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 ZP1P60852 638 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 INSM1Q01101 510 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 MGAT2Q10469 447 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF345Q14585 488 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF273Q14593 569 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 OR5T1Q8NG75 326 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 SFT2D1Q8WV19 159 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 SGK3Q96BR1 496 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF845Q96IR2 970 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF230Q9UIE0 474 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 SMCO3A2RU48 225 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 MFSD2BA6NFX1 497 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 CDC14BO60729 498 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 ABHD16AO95870 558 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 NRASP01111 189 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 IFNA4P05014 189 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 SFTA3P0C7M3 94 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 SLC25A4P12235 298 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 ICAM2P13598 275 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 FOLR1P15328 257 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 OR3A4PP47883 348 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 UBE2NP61088 152 aaKnown RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 MRPS34P82930 218 aaKnown RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 KIAA0141Q14154 515 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 EXT1Q16394 746 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 HIST2H3AQ71DI3 136 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 OR51F2Q8NH61 342 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 ASB10Q8WXI3 467 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 PTX4Q96A99 478 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 RBMXL1Q96E39 390 aaKnown RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 AKR1E2Q96JD6 320 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 CDH20Q9HBT6 801 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 FAM96BQ9Y3D0 163 aa5.96□□□□□ -1.46
CSDE1-205ENST00000438362 MRPS18BQ9Y676 258 aaKnown RBP5.96□□□□□ -1.46
CSDE1-205ENST00000438362 IGHV1OR21-1A0A087WYE8 117 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 KIR2DS1A0A191URI9 304 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 ANGPTL7O43827 346 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 VSIG8P0DPA2 414 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 KIR2DS4P43632 304 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 KIR2DS1Q14954 304 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 AADACL3Q5VUY0 350 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 SYT13Q7L8C5 426 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF561Q8N587 486 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 SLC26A10Q8NG04 563 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 SPACA9Q96E40 222 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 SAT2Q96F10 170 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 SCARF2Q96GP6 870 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 KIRREL1Q96J84 757 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 SHARPINQ9H0F6 387 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 OR51B6Q9H340 312 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 ENY2Q9NPA8 101 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 BOKQ9UMX3 212 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 E9PQ18 207 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 MBTPS2O43462 519 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 PIAS2O75928 621 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 DFFBO76075 338 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 OR2C1O95371 312 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 HPNP05981 417 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 CD63P08962 238 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 OR2B8PP59922 312 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 RPS11P62280 158 aaKnown RBP eCLIP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 HBG1P69891 147 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 HBG2P69892 147 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 TFF2Q03403 129 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 EIF2S3LQ2VIR3 472 aaKnown RBP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 TMEM268Q5VZI3 342 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 CLEC18BQ6UXF7 455 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 TFAP2EQ6VUC0 442 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 OR5AP2Q8NGF4 316 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 RNF133Q8WVZ7 376 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF426Q9BUY5 554 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 SUCNR1Q9BXA5 334 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 NMES1Q9C002 83 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 UQCC1Q9NVA1 299 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 VSIG4Q9Y279 399 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 YBX2Q9Y2T7 364 aaKnown RBP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 NOSIPQ9Y314 301 aaKnown RBP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 IGKV1D-42A0A075B6H8 117 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 J3QRE1 110 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 SOCS1O15524 211 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 LAMTOR5O43504 91 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 PNPP00491 289 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 MYF5P13349 255 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 FSTP19883 344 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 TCN2P20062 427 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 AKR1C3P42330 323 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 RAB13P51153 203 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 NDUFA6P56556 154 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 ROM1Q03395 351 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 SP6Q3SY56 376 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms