RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SIGLEC11Q96RL6 698 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 SLC25A31Q9H0C2 315 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 SMCO4Q9NRQ5 59 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 U3KQA8 63 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 APEX1P27695 318 aaKnown RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 MVDP53602 400 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 CREB3L2Q70SY1 520 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 LGALS14Q8TCE9 139 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 CNTNAP3Q9BZ76 1288 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 PURGQ9UJV8 347 aaKnown RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 SEMG1P04279 462 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 CTSSP25774 331 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 CDKN2AP42771 156 aaKnown RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 GP2P55259 537 aaKnown RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF239Q16600 458 aaKnown RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 SOWAHCQ53LP3 525 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 CLVS2Q5SYC1 327 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 PRSS45Q7RTY3 260 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF75AQ96N20 296 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 TGM6O95932 706 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 C1QCP02747 245 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 IDO2Q6ZQW0 420 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 PIP4P1Q86T03 277 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF573Q86YE8 665 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 NPEPL1Q8NDH3 523 aa11.45□□□□□ -0.58
PTCH1-207ENST00000429896 OPN3Q9H1Y3 402 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 UNKLQ9H9P5 680 aaKnown RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 CGGBP1Q9UFW8 167 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 TDRD6O60522 2096 aaKnown RBP11.45□□□□□ -0.58
PTCH1-207ENST00000429896 GABARAPH6UMI1 98 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 SPRY3O43610 288 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 PRKACAP17612 351 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 NOXA1Q86UR1 476 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 TCTEX1D2Q8WW35 142 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 PINX1Q96BK5 328 aaKnown RBP11.44□□□□□ -0.58
PTCH1-207ENST00000429896 METTL17Q9H7H0 456 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-207ENST00000429896 PATZ1Q9HBE1 687 aaKnown RBP11.44□□□□□ -0.58
PTCH1-207ENST00000429896 OR6C68A6NDL8 312 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 TNFRSF1AP19438 455 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 UBE2KP61086 200 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 DRAM2Q6UX65 266 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 NUFIP2Q7Z417 695 aaKnown RBP11.44□□□□□ -0.58
PTCH1-207ENST00000429896 OR1M1Q8NGA1 313 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 PCDHGA9Q9Y5G4 932 aaKnown RBP11.44□□□□□ -0.58
PTCH1-207ENST00000429896 FFAR1O14842 300 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 TBX6O95947 436 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-207ENST00000429896 APOA2P02652 100 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 OR8U8P0C7N1 319 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 UBBP0CG47 229 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 PPT1P50897 306 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 LAX1Q8IWV1 398 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF703Q9H7S9 590 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-207ENST00000429896 KIAA1671Q9BY89 1806 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 AIPO00170 330 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 CCSO14618 274 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 RTP5Q14D33 572 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 THSD4Q6ZMP0 1018 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 FN3KRPQ9HA64 309 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 KCNMB2Q9Y691 235 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 BRWD1Q9NSI6 2320 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 RER1O15258 196 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 TAS2R19P59542 299 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 ADPRHL1Q8NDY3 354 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 ZCCHC4Q9H5U6 513 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 UBTD1Q9HAC8 227 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 TAS2R4Q9NYW5 299 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 TRAF3IP2O43734 574 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-207ENST00000429896 TNFSF8P32971 234 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 MTNR1BP49286 362 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 NPY4RP50391 375 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 CCR6P51684 374 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 MEF2DQ14814 521 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 Q6ZTK2 550 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 GDPD3Q7L5L3 318 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 OPALINQ96PE5 141 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF416Q9BWM5 594 aa11.44□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF552Q9H707 407 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-207ENST00000429896 ANKRD61A6NGH8 418 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 CTDSP2O14595 271 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 NTN1O95631 604 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 MESTQ5EB52 335 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 LRP12Q9Y561 859 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
PTCH1-207ENST00000429896 GLRA1P23415 457 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 GLIPR1L1Q6UWM5 242 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 OR51H1Q8NH63 302 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 MEIOCA2RUB1 952 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 FAM221AA4D161 298 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 MAGEB4O15481 346 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-207ENST00000429896 XRCC3O43542 346 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 SIX6O95475 246 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 GPANK1O95872 356 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 CST2P09228 141 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 RPS4Y1P22090 263 aaKnown RBP11.43□□□□□ -0.58
PTCH1-207ENST00000429896 CAMK2BQ13554 666 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 PEA15Q15121 130 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 MSMO1Q15800 293 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 OR8B4Q96RC9 309 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 ADAM19Q9H013 955 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 PLK3Q9H4B4 646 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms