RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 DUX4L9Q6RFH8 374 aaPredicted RBP12.25□□□□□ -0.45
MSH5-208ENST00000429846 PDZD9Q8IXQ8 264 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 ZSCAN4Q8NAM6 433 aaPredicted RBP12.25□□□□□ -0.45
MSH5-208ENST00000429846 UBE2FQ969M7 185 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 PGAM5Q96HS1 289 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 RBM4BQ9BQ04 359 aaKnown RBP12.25□□□□□ -0.45
MSH5-208ENST00000429846 HAO2Q9NYQ3 351 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 DNAJB11Q9UBS4 358 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 DUX4Q9UBX2 424 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 VPREB3Q9UKI3 123 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 RHBDD3Q9Y3P4 386 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 U3KQV3 271 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 TGP01266 2768 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 ARRDC5A6NEK1 342 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 ACOT8O14734 319 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 LYNP07948 512 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 TGM4P49221 684 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 PPP1R8Q12972 351 aaKnown RBP12.24□□□□□ -0.45
MSH5-208ENST00000429846 IKZF1Q13422 519 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 TAF9Q16594 264 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 DHRS7BQ6IAN0 325 aaPredicted RBP12.24□□□□□ -0.45
MSH5-208ENST00000429846 C1orf122Q6ZSJ8 110 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 DHFR2Q86XF0 187 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.24□□□□□ -0.45
MSH5-208ENST00000429846 TIGD4Q8IY51 512 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 FGFRL1Q8N441 504 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 OR10G2Q8NGC3 310 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 MED30Q96HR3 178 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 RAB3IPQ96QF0 476 aaPredicted RBP12.24□□□□□ -0.45
MSH5-208ENST00000429846 C16orf95Q9H693 158 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 SIRT7Q9NRC8 400 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 VNN3Q9NY84 501 aa12.24□□□□□ -0.45
MSH5-208ENST00000429846 FAM183AA6NL82 134 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 H3BN98 237 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 CST4P01036 141 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 TGFBR2P37173 567 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 KRTAP10-3P60369 221 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 PRDX4Q13162 271 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 TRIM25Q14258 630 aaKnown RBP12.23□□□□□ -0.45
MSH5-208ENST00000429846 FAM76BQ5HYJ3 339 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 NCR3LG1Q68D85 454 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 ASPHD2Q6ICH7 369 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 Q6ZSV7 163 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 ZNF454Q8N9F8 522 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 PAPD5Q8NDF8 572 aaKnown RBP12.23□□□□□ -0.45
MSH5-208ENST00000429846 OR5R1Q8NH85 324 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 OTOSQ8NHW6 89 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 OR5P3Q8WZ94 311 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 ITFG2Q969R8 447 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 PKP2Q99959 881 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 NIPSNAP1Q9BPW8 284 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 NIPAL2Q9H841 368 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 TCF7L1Q9HCS4 588 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 BRD7Q9NPI1 651 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 ZNF319Q9P2F9 582 aa12.23□□□□□ -0.45
MSH5-208ENST00000429846 SLC22A31A6NKX4 558 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 RNASEK-C17orf49H0YIS7 233 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 M0R1W7 72 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 NPFFO15130 113 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 PRODHO43272 600 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 TSPAN9O75954 239 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 PAHP00439 452 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 RAP2AP10114 183 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 AMY2BP19961 511 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 CAV3P56539 151 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 PSMA6P60900 246 aaKnown RBP12.22□□□□□ -0.45
MSH5-208ENST00000429846 ELF3P78545 371 aaPredicted RBP12.22□□□□□ -0.45
MSH5-208ENST00000429846 ACSM1Q08AH1 577 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 ZNF788Q6ZQV5 615 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 PIGWQ7Z7B1 504 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 Q8N7P7 452 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 H1FXQ92522 213 aaKnown RBP12.22□□□□□ -0.45
MSH5-208ENST00000429846 OTULINQ96BN8 352 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 SEH1LQ96EE3 360 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 AMELYQ99218 206 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 PPP1R3EQ9H7J1 279 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 METTL8Q9H825 291 aaKnown RBP12.22□□□□□ -0.45
MSH5-208ENST00000429846 MED20Q9H944 212 aa12.22□□□□□ -0.45
MSH5-208ENST00000429846 SLC25A10Q9UBX3 287 aaPredicted RBP12.22□□□□□ -0.45
MSH5-208ENST00000429846 A0A0G2JK05 382 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 ZNF850A8MQ14 1090 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 PRR23D1E9PI22 279 aaPredicted RBP12.21□□□□□ -0.45
MSH5-208ENST00000429846 SIGLEC5O15389 551 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 PRR23D2P0DMB1 279 aaPredicted RBP12.21□□□□□ -0.45
MSH5-208ENST00000429846 ACKR3P25106 362 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 DCTDP32321 178 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 SAA4P35542 130 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 UBE2E1P51965 193 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 BLMHQ13867 455 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 C2orf68Q2NKX9 166 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 KCTD8Q6ZWB6 473 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 ZDHHC23Q8IYP9 409 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 IQCF1Q8N6M8 205 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 OR5T2Q8NGG2 359 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 ANGPTL6Q8NI99 470 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 GIPC3Q8TF64 312 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 HPSE2Q8WWQ2 592 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 RPL3LQ92901 407 aaKnown RBP12.21□□□□□ -0.45
MSH5-208ENST00000429846 TNFRSF14Q92956 283 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 ASB9Q96DX5 294 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms