RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 MPC1Q9Y5U8 109 aa12.32□□□□□ -0.44
SGCE-204ENST00000428696 LOC100289279A0A1B0GTE1 492 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 LRRC30A6NM36 301 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 RGS10O43665 173 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 CYB5R3P00387 301 aaPredicted RBP12.31□□□□□ -0.44
SGCE-204ENST00000428696 CST4P01036 141 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 NRASP01111 189 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 CCDC159P0C7I6 412 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 SLC25A16P16260 332 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 ZNF20P17024 532 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 USF1P22415 310 aaPredicted RBP12.31□□□□□ -0.44
SGCE-204ENST00000428696 MRPS11P82912 194 aaKnown RBP12.31□□□□□ -0.44
SGCE-204ENST00000428696 MRPL28Q13084 256 aaKnown RBP12.31□□□□□ -0.44
SGCE-204ENST00000428696 RBM48Q5RL73 367 aaKnown RBP12.31□□□□□ -0.44
SGCE-204ENST00000428696 FDX2Q6P4F2 183 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
SGCE-204ENST00000428696 RTL8AQ9BWD3 113 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 FN3KRPQ9HA64 309 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 TRIM36Q9NQ86 728 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 TMEM106BQ9NUM4 274 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 V9GYS6 101 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 VPS13CQ709C8 3753 aa12.31□□□□□ -0.44
SGCE-204ENST00000428696 LRP5LA4QPB2 252 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 OR4C45A6NMZ5 311 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 ZNF732B4DXR9 585 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 DENRO43583 198 aaKnown RBP12.3□□□□□ -0.44
SGCE-204ENST00000428696 RP2O75695 350 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 SERPINA3P01011 423 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 ZNF12P17014 697 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 CRHBPP24387 322 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 GPM6AP51674 278 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 CCR9P51686 369 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 CDH15P55291 814 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 GMFBP60983 142 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 MED22Q15528 200 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 CLVS2Q5SYC1 327 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 XAF1Q6GPH4 301 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 RPL22L1Q6P5R6 122 aaKnown RBP12.3□□□□□ -0.44
SGCE-204ENST00000428696 DNM1P46Q6ZS02 220 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 OR51A4Q8NGJ6 313 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 OR10AC1Q8NH08 325 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 OR52N1Q8NH53 320 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 NPRL2Q8WTW4 380 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 TSEN15Q8WW01 171 aaKnown RBP12.3□□□□□ -0.44
SGCE-204ENST00000428696 OR5P3Q8WZ94 311 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 C18orf12Q96KH6 178 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 FKBP14Q9NWM8 211 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 UBAP1Q9NZ09 502 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 BLOC1S6Q9UL45 172 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 HHLA2Q9UM44 414 aa12.3□□□□□ -0.44
SGCE-204ENST00000428696 CELSR1Q9NYQ6 3014 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 FAM230AA0A1W2PPH8 454 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 TMEM212A6NML5 194 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 ZFPL1O95159 310 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 IGLV3-1P01715 115 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 HSMCR30P0CW71 290 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 GIFP27352 417 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 THBS2P35442 1172 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 CD200P41217 278 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 SOX2P48431 317 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 TGM4P49221 684 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 WNT4P56705 351 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 RIN1Q13671 783 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 ZNF826PQ6ZT77 177 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 EGFL6Q8IUX8 553 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 NANOGP1Q8N7R0 232 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 PLPP7Q8NBV4 271 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 C19orf18Q8NEA5 215 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 DEFB108BQ8NET1 73 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 TRMT10AQ8TBZ6 339 aaKnown RBP12.29□□□□□ -0.44
SGCE-204ENST00000428696 HAVCR2Q8TDQ0 301 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 MND1Q9BWT6 205 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 ABCB9Q9NP78 766 aa12.29□□□□□ -0.44
SGCE-204ENST00000428696 SIRT4Q9Y6E7 314 aaPredicted RBP12.29□□□□□ -0.44
SGCE-204ENST00000428696 IGHV4-61A0A0C4DH41 118 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 ANKRD61A6NGH8 418 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 LALBAP00709 142 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 MT-ND2P03891 347 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 ISG15P05161 165 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
SGCE-204ENST00000428696 INHBBP09529 407 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 PMELP40967 661 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 SLC35A2P78381 396 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 CEACAM21Q3KPI0 293 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 CCDC58Q4VC31 144 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 CELF2-AS1Q8N7Q2 184 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 RPL3LQ92901 407 aaKnown RBP12.28□□□□□ -0.44
SGCE-204ENST00000428696 HPS1Q92902 700 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 ITPKCQ96DU7 683 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 SMR3AQ99954 134 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 GAL3ST1Q99999 423 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 DUSP21Q9H596 190 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 METTL17Q9H7H0 456 aaPredicted RBP12.28□□□□□ -0.44
SGCE-204ENST00000428696 PCDHB10Q9UN67 800 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 SLC7A11Q9UPY5 501 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 DHDHQ9UQ10 334 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 WIPI2Q9Y4P8 454 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 A0A1B0GWJ7 208 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 TMEM178BH3BS89 294 aa12.28□□□□□ -0.44
SGCE-204ENST00000428696 CDIPTO14735 213 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms