RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 MXD1Q05195 221 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 EFNB3Q15768 340 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 DMRTC1Q5HYR2 192 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 SP5Q6BEB4 398 aaPredicted RBP6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 UNQ9370/PRO34162Q6UXP9 181 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 MOB3CQ70IA8 216 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 UTS2BQ765I0 119 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 MUC15Q8N387 334 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR2Z1Q8NG97 314 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR51A2Q8NGJ7 313 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR13G1Q8NGZ3 307 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 NDNFQ8TB73 568 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 TRMT10AQ8TBZ6 339 aaKnown RBP6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 GTF3AQ92664 365 aaKnown RBP6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 ELMOD3Q96FG2 381 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 TECTBQ96PL2 329 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 HIST1H2AAQ96QV6 131 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 BCL7BQ9BQE9 202 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 RTL8AQ9BWD3 113 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 RBM38Q9H0Z9 239 aaKnown RBP6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 PPP1R3EQ9H7J1 279 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 NEK6Q9HC98 313 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 ABCB9Q9NP78 766 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 CYSLTR2Q9NS75 346 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 TMEM100Q9NV29 134 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 NKIRAS2Q9NYR9 191 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 NDUFA13Q9P0J0 144 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 PLEKHB1Q9UF11 243 aaPredicted RBP6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 CGGBP1Q9UFW8 167 aaPredicted RBP6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 SLC7A11Q9UPY5 501 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 MPC1Q9Y5U8 109 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 SPTAN1Q13813 2472 aaKnown RBP6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 SPTBN1Q01082 2364 aaKnown RBP6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 ADGRG4Q8IZF6 3080 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 TRAV1-2A0A0B4J238 106 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 IGKV1-9A0A0C4DH69 117 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 IGHV3-64DA0A0J9YX35 117 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 A0A1W2PPR1 153 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 B9A039 149 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 PDCD5O14737 125 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 TPD52L2O43399 206 aaKnown RBP6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 SPRY3O43610 288 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 CTAG2O75638 210 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 CDRT1O95170 752 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 PLATP00750 562 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 NAT2P11245 290 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 IGFBP3P17936 291 aaPredicted RBP6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 ATF1P18846 271 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 SRMP19623 302 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 TNFSF4P23510 183 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 BDKRB2P30411 391 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 SDC2P34741 201 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 MTNR1BP49286 362 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 GPM6AP51674 278 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR10A3P58181 314 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 TLE4Q04727 773 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 UBE2V2Q15819 145 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 DDI2Q5TDH0 399 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 AGAP6Q5VW22 663 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 TMEM42Q69YG0 159 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 ASPHD2Q6ICH7 369 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 Q6ZR03 302 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 USP43Q70EL4 1123 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 JAGN1Q8N5M9 183 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 NKAIN3Q8N8D7 197 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 DNAAF1Q8NEP3 725 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 SPSB1Q96BD6 273 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 C12orf43Q96C57 262 aaKnown RBP6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 CPNE2Q96FN4 548 aaPredicted RBP6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 RNF170Q96K19 258 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 PSMG3-AS1Q96PY0 264 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 SPACA5Q96QH8 159 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 MICU1Q9BPX6 476 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 SLC30A2Q9BRI3 323 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 FAM192AQ9GZU8 254 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 SLC22A4Q9H015 551 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 DCSTAMPQ9H295 470 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 TPK1Q9H3S4 243 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 TMEM138Q9NPI0 162 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 FOXJ3Q9UPW0 622 aa6.75□□□□□ -1.33
HMGA1P4-201ENST00000428643 NBPF19A0A087WUL8 3843 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 SHISA3A0PJX4 238 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 MEGF11A6BM72 1044 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 A6NHS1 94 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR5B21A6NL26 309 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 CYSRT1A8MQ03 144 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF732B4DXR9 585 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 F5H5P2 479 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 H0YL77 283 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF701M0R085 212 aaPredicted RBP6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 MLNRO43193 412 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 NCR1O76036 304 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 SOD3P08294 240 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 CLEC2LP0C7M8 214 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 BMP4P12644 408 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 RAB3BP20337 219 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 POU3F4P49335 361 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 EVX1P49640 407 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 MMP15P51511 669 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 MTCP1P56278 107 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms