RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ANGPTL4Q9BY76 406 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 GAL3ST2Q9H3Q3 398 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 SRD5A3Q9H8P0 318 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 B3GALT5Q9Y2C3 310 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 WSB1Q9Y6I7 421 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 ITGB1BP1O14713 200 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 CYB5R3P00387 301 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-206ENST00000428313 CST2P09228 141 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 IFI6P09912 130 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 PGA3P0DJD8 388 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 FUT3P21217 361 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 DPTQ07507 201 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 MFGE8Q08431 387 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-206ENST00000428313 FBXW9Q5XUX1 488 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 SP5Q6BEB4 398 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-206ENST00000428313 ZNF761Q86XN6 746 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-206ENST00000428313 OR10A7Q8NGE5 316 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 OR5L2Q8NGL0 311 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 OR13G1Q8NGZ3 307 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 WFIKKN2Q8TEU8 576 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 CNTD2Q9H8S5 307 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 A0A1B0GV50 99 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 RAB28P51157 221 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 BTG2P78543 158 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 CCL20P78556 96 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 SP3Q02447 781 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 TLE4Q04727 773 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 FAM78AQ5JUQ0 283 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 SLC18B1Q6NT16 456 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 PARS2Q7L3T8 475 aaKnown RBP14.25□□□□□ -0.13
C9orf3-206ENST00000428313 PPP1R14AQ96A00 147 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 TMEM18Q96B42 140 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 PARD6AQ9NPB6 346 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 GRHPRQ9UBQ7 328 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 COL4A6Q14031 1691 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 A6NNC1 897 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 HOXA2O43364 376 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 SLC35G6P0C7Q6 338 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 VSIG8P0DPA2 414 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 HSD11B1P28845 292 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 GATMP50440 423 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 FOXF1Q12946 379 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 TMEM176BQ3YBM2 270 aaPredicted RBP14.25□□□□□ -0.13
C9orf3-206ENST00000428313 PLXDC2Q6UX71 529 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 OR4N5Q8IXE1 308 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 LPAR4Q99677 370 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 LPAR2Q9HBW0 351 aa14.25□□□□□ -0.13
C9orf3-206ENST00000428313 A0A1B0GU03 582 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 H7C1C5 153 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 NKX2-2O95096 273 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 ISG15P05161 165 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 FGF5P12034 268 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 GLRA1P23415 457 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 TLX1P31314 330 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-206ENST00000428313 NOVA1P51513 510 aaKnown RBP14.24□□□□□ -0.13
C9orf3-206ENST00000428313 LCN6P62502 163 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 KIF26BQ2KJY2 2108 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 POM121L1PQ3SYA9 428 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 C1QL3Q5VWW1 255 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 KCTD18Q6PI47 426 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-206ENST00000428313 PRSS58Q8IYP2 241 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 OR2I1PQ8NGU4 316 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 RAB11FIP5Q9BXF6 653 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 SEMA5BQ9P283 1151 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 LIPGQ9Y5X9 500 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 COL4A2P08572 1712 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 XKRY2A2RUG3 117 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 DHRS7CA6NNS2 312 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 XKRYO14609 159 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 EFEMP2O95967 443 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 PTGER4P35408 488 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 GNALP38405 381 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 CEBPGP53567 150 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 COL10A1Q03692 680 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 FZD2Q14332 565 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 ZNF74Q16587 644 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 TAF9Q16594 264 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 HLA-CQ95604 372 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 TSPAN32Q96QS1 320 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 URM1Q9BTM9 101 aaKnown RBP14.24□□□□□ -0.13
C9orf3-206ENST00000428313 CTDSP1Q9GZU7 261 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 IL21Q9HBE4 155 aa14.24□□□□□ -0.13
C9orf3-206ENST00000428313 C14orf166Q9Y224 244 aaKnown RBP14.24□□□□□ -0.13
C9orf3-206ENST00000428313 SCN2AQ99250 2005 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 IGKV1D-42A0A075B6H8 117 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 A8MVM7 634 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 ETV2O00321 342 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-206ENST00000428313 SPINT1O43278 529 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 HSPA12AO43301 675 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 RBX1P62877 108 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 BTNL3Q6UXE8 466 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 GALNTL5Q7Z4T8 443 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 ADIPOR2Q86V24 386 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 C22orf15Q8WYQ4 148 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 HOXB13Q92826 284 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-206ENST00000428313 RBMXL1Q96E39 390 aaKnown RBP14.23□□□□□ -0.13
C9orf3-206ENST00000428313 THOC3Q96J01 351 aaKnown RBP14.23□□□□□ -0.13
C9orf3-206ENST00000428313 HCSTQ9UBK5 93 aa14.23□□□□□ -0.13
C9orf3-206ENST00000428313 LOC107986453A0A1B0GWG9 222 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 MANSC4A6NHS7 340 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms