RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 ADARB2-AS1A8MUL3 147 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 AKR7A2O43488 359 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 ACAA1P09110 424 aaPredicted RBP11.88□□□□□ -0.51
PDAP1-202ENST00000426447 SPARCP09486 303 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 PF4V1P10720 104 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 MSX2P35548 267 aaPredicted RBP11.88□□□□□ -0.51
PDAP1-202ENST00000426447 SLC15A1P46059 708 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 IL5RAQ01344 420 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 GFOD2Q3B7J2 385 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 ARPINQ7Z6K5 226 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 SLC15A3Q8IY34 581 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 MKXQ8IYA7 352 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 TMEM185AQ8NFB2 350 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 OR10Z1Q8NGY1 313 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 ANGPTL6Q8NI99 470 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 RPL3LQ92901 407 aaKnown RBP11.88□□□□□ -0.51
PDAP1-202ENST00000426447 SGK3Q96BR1 496 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 AJUBAQ96IF1 538 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 DDOQ99489 341 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 OCSTAMPQ9BR26 566 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 RTL8AQ9BWD3 113 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 SP140LQ9H930 580 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 ELL3Q9HB65 397 aaPredicted RBP11.88□□□□□ -0.51
PDAP1-202ENST00000426447 NDUFAF4Q9P032 175 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 RHBDD3Q9Y3P4 386 aa11.88□□□□□ -0.51
PDAP1-202ENST00000426447 RYR3Q15413 4870 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 A0A1W2PPH5 198 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 OR2AT4A6NND4 320 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 SIGLEC5O15389 551 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 DIRAS1O95057 198 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 CFL1P23528 166 aaKnown RBP11.87□□□□□ -0.51
PDAP1-202ENST00000426447 HSD11B1P28845 292 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 CX3CR1P49238 355 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 GSK3AP49840 483 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 RAB13P51153 203 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 CAPZA1P52907 286 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 CNN3Q15417 329 aaKnown RBP11.87□□□□□ -0.51
PDAP1-202ENST00000426447 SNCBQ16143 134 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 PLA1AQ53H76 456 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 FTMTQ8N4E7 242 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 ZNRF1Q8ND25 227 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 PAPD5Q8NDF8 572 aaKnown RBP11.87□□□□□ -0.51
PDAP1-202ENST00000426447 CSNK2A3Q8NEV1 391 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 OR51L1Q8NGJ5 315 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 OR2T4Q8NH00 348 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 PIFOQ8TCI5 191 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 RCN3Q96D15 328 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 SAR1AQ9NR31 198 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 ABCB10Q9NRK6 738 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 NLKQ9UBE8 527 aa11.87□□□□□ -0.51
PDAP1-202ENST00000426447 hCG_1809904A0A1W2PP81 198 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 A0A1W2PPE2 198 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 A0A1W2PR64 198 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 A0A1W2PRV1 198 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 ZNF878C9JN71 531 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 ZNF593O00488 134 aaPredicted RBP11.86□□□□□ -0.51
PDAP1-202ENST00000426447 PF4P02776 101 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 NCK1P16333 377 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 GLRA1P23415 457 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 COX7A1P24310 79 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 SMIM11AP58511 58 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 GRB2P62993 217 aaKnown RBP11.86□□□□□ -0.51
PDAP1-202ENST00000426447 SLC35A2P78381 396 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 SF3A3Q12874 501 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDAP1-202ENST00000426447 LYPD4Q6UWN0 246 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 Q8N2B8 174 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 RNF170Q96K19 258 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 CDCA4Q9BXL8 241 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 PITPNC1Q9UKF7 332 aa11.86□□□□□ -0.51
PDAP1-202ENST00000426447 WI2-2373I1.2A0A1W2PRP0 233 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 TMEM210A6NLX4 147 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 ZNF850A8MQ14 1090 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 GADD45GO95257 159 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 FMO3P31513 532 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 IFNGR2P38484 337 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 ENTPD1P49961 510 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 MXRA7P84157 204 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 SPIBQ01892 262 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 FAM57BQ71RH2 274 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 TMEM219Q86XT9 240 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 TIGD4Q8IY51 512 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 FAM86B1Q8N7N1 296 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 OR52H1Q8NGJ2 320 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 ZNRF4Q8WWF5 429 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 HIST1H2AAQ96QV6 131 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 BRD7Q9NPI1 651 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 DNAJC27Q9NZQ0 273 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 TCF19Q9Y242 345 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 MPC1Q9Y5U8 109 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 COMMD3-BMI1R4GMX3 469 aa11.85□□□□□ -0.51
PDAP1-202ENST00000426447 hCG_38984A0A1B0GV85 526 aa11.84□□□□□ -0.51
PDAP1-202ENST00000426447 MEGF11A6BM72 1044 aa11.84□□□□□ -0.51
PDAP1-202ENST00000426447 E9PQ18 207 aa11.84□□□□□ -0.51
PDAP1-202ENST00000426447 NME4O00746 187 aa11.84□□□□□ -0.51
PDAP1-202ENST00000426447 APOC1P02654 83 aa11.84□□□□□ -0.51
PDAP1-202ENST00000426447 ALDOBP05062 364 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms