RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SPDEFO95238 335 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 NR2C1P13056 603 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 HIST1H1DP16402 221 aaKnown RBP10.13□□□□□ -0.79
UBR4-207ENST00000425413 ZNF32P17041 273 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 ACKR3P25106 362 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 PTGFRP43088 359 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 CEACAM16Q2WEN9 425 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 TMUB2Q71RG4 321 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 PNLDC1Q8NA58 520 aaKnown RBP10.13□□□□□ -0.79
UBR4-207ENST00000425413 S100A13Q99584 98 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 DHRS9Q9BPW9 319 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 ZNF581Q9P0T4 197 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 KCNN3Q9UGI6 736 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 NCKAP5O14513 1909 aa10.13□□□□□ -0.79
UBR4-207ENST00000425413 EEF1E1-BLOC1S5C9J1V9 151 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 GP1BAP07359 652 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 SP9P0CG40 484 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 TMEM225BP0DP42 221 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 RRASP10301 218 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 ICAM2P13598 275 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 MGMTP16455 207 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 SPINK2P20155 84 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 HTR5AP47898 357 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 IL13RA1P78552 427 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 SSPNQ14714 243 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 HLXQ14774 488 aaPredicted RBP10.12□□□□□ -0.79
UBR4-207ENST00000425413 MEF2DQ14814 521 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 SMUG1Q53HV7 270 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 C20orf196Q8IYI0 205 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 RBPMSQ93062 196 aaKnown RBP10.12□□□□□ -0.79
UBR4-207ENST00000425413 SGK3Q96BR1 496 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 TAAR9Q96RI9 348 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 PRRT1Q99946 306 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 OR10A2Q9H208 303 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 FN3KRPQ9HA64 309 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 MAP1BP46821 2468 aaKnown RBP10.12□□□□□ -0.79
UBR4-207ENST00000425413 CFAP47Q6ZTR5 3102 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 C13orf42A0A1B0GVH6 325 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 GJE1A6NN92 205 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 M0R296 226 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 RP2O75695 350 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 DHRS3O75911 302 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 ZNF205O95201 554 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 SERPINA7P05543 415 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 CCNOP22674 350 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 S100A11P31949 105 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 C3AR1Q16581 482 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 BRICD5Q6PL45 260 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 ARMC10Q8N2F6 343 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 OR2V1Q8NHB1 315 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 SPTSSAQ969W0 71 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 MFFQ9GZY8 342 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 ZNF701Q9NV72 531 aaPredicted RBP10.12□□□□□ -0.79
UBR4-207ENST00000425413 IL17BQ9UHF5 180 aa10.12□□□□□ -0.79
UBR4-207ENST00000425413 A0A096LPE4 126 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 A0A1W2PPZ6 126 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 HPP00738 406 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 AMY2BP19961 511 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 MTCP1P56278 107 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 ECH1Q13011 328 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 PDCD1Q15116 288 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 GALNTL5Q7Z4T8 443 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 C6orf201Q7Z4U5 140 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 GALNT11Q8NCW6 608 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 HDHD3Q9BSH5 251 aaPredicted RBP10.11□□□□□ -0.79
UBR4-207ENST00000425413 ARPC4-TTLL3A0A0A6YYG9 625 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 ZNF716A6NP11 495 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 H3BUI4 141 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 LGALS8O00214 317 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 CCL1P22362 96 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 CAPZA1P52907 286 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 ATP1A1-AS1Q5TC04 95 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 TMEM65Q6PI78 240 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 CRIP3Q6Q6R5 217 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 NAXDQ8IW45 347 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 FBXW5Q969U6 566 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 URM1Q9BTM9 101 aaKnown RBP10.11□□□□□ -0.79
UBR4-207ENST00000425413 PCSK5Q92824 1860 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 TRAV14DV4A0A0A6YYC5 116 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 IGHEP01854 428 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 MELTFP08582 738 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 CCL2P13500 99 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 MRPS34P82930 218 aaKnown RBP10.11□□□□□ -0.79
UBR4-207ENST00000425413 SLC9A3R2Q15599 337 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 PXDC1Q5TGL8 231 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 ABHD17BQ5VST6 288 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 FAM27BQ5VT28 67 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 SLC16A14Q7RTX9 510 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 ZNF546Q86UE3 836 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 REEP6Q96HR9 211 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 SLC6A15Q9H2J7 730 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 AUP1Q9Y679 476 aa10.11□□□□□ -0.79
UBR4-207ENST00000425413 hCG_1807616A0A1W2PRN6 198 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 OR5H14A6NHG9 310 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 CHRM2P08172 466 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 GMFBP60983 142 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 NHLRC3Q5JS37 347 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 CSNK2A3Q8NEV1 391 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 OR56B1Q8NGI3 324 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms