RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 THBS4P35443 961 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 RABIFP47224 123 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 PCK2Q16822 640 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 TSPO2Q5TGU0 170 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 CHRDL2Q6WN34 429 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 MED25Q71SY5 747 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 GRASPQ7Z6J2 395 aaPredicted RBP10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 NRSN1Q8IZ57 195 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 ZDHHC22Q8N966 263 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 KREMEN2Q8NCW0 462 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 OTOSQ8NHW6 89 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 BADQ92934 168 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 CDC6Q99741 560 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 PRODH2Q9UF12 536 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 FRYLO94915 3013 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 CCDC187A0A096LP49 1063 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 LOC107986453A0A1B0GWG9 222 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 SMCO3A2RU48 225 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 SFT2D2O95562 160 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 NPSP0C0P6 89 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 IGFALSP35858 605 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 NOVA1P51513 510 aaKnown RBP10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 BPIFB3P59826 476 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 HOGA1Q86XE5 327 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 RAB42Q8N4Z0 105 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 NPRL2Q8WTW4 380 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 C2orf50Q96LR7 162 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 SLC17A5Q9NRA2 495 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 LRP12Q9Y561 859 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 LIPGQ9Y5X9 500 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 ZNF217O75362 1048 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 RAD51DO75771 328 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 NXPH3O95157 252 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 UCP2P55851 309 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 PRICKLE4Q2TBC4 344 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 FHL5Q5TD97 284 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 FBXO42Q6P3S6 717 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 FAM180AQ6UWF9 173 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 ZNF700Q9H0M5 742 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 SLCO5A1Q9H2Y9 848 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 SRMSQ9H3Y6 488 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 CERS4Q9HA82 394 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 PCNX3Q9H6A9 2034 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 CD200P41217 278 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 EMP2P54851 167 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 EGR4Q05215 589 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 ARFRP1Q13795 201 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 ZNHIT3Q15649 155 aaPredicted RBP10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 DEFB110Q30KQ9 67 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 PLAC9Q5JTB6 97 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 HIST2H3PS2Q5TEC6 136 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 LINC00114Q6XXX2 140 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 POC1AQ8NBT0 407 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 OR9A4Q8NGU2 314 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 RSC1A1Q92681 617 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 MRPL24Q96A35 216 aaKnown RBP10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 STACQ99469 402 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 ZNF107Q9UII5 783 aaPredicted RBP10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 GPR132Q9UNW8 380 aa10.01□□□□□ -0.81
SEC61A1-202ENST00000424880 SDK1Q7Z5N4 2213 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 B3GALT2O43825 422 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 AHSA1O95433 338 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 SLC35G6P0C7Q6 338 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 GZMBP10144 247 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 BCKDHBP21953 392 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 CD226Q15762 336 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 LANCL3Q6ZV70 420 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 CPEB2Q7Z5Q1 589 aaKnown RBP10□□□□□ -0.81
SEC61A1-202ENST00000424880 COMMD1Q8N668 190 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 OR8B4Q96RC9 309 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 ABHD6Q9BV23 337 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 SNHG12Q9BXW3 62 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 FAM221AA4D161 298 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 HCRTR1O43613 425 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 MBPP02686 304 aaPredicted RBP10□□□□□ -0.81
SEC61A1-202ENST00000424880 CTLA4P16410 223 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 PLA2G5P39877 138 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 PRPS1P60891 318 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 SLC35A1P78382 337 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 GAGE1Q13065 139 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 THEM4Q5T1C6 240 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 COMMD2Q86X83 199 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 SFTPA2Q8IWL1 248 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 PRSS58Q8IYP2 241 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 NECAP1Q8NC96 275 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 CCL4L1Q8NHW4 92 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 RBM18Q96H35 190 aaKnown RBP10□□□□□ -0.81
SEC61A1-202ENST00000424880 FREM2Q5SZK8 3169 aa10□□□□□ -0.81
SEC61A1-202ENST00000424880 JTBO76095 146 aa9.99□□□□□ -0.81
SEC61A1-202ENST00000424880 KLF8O95600 359 aaPredicted RBP9.99□□□□□ -0.81
SEC61A1-202ENST00000424880 IL18BPO95998 194 aa9.99□□□□□ -0.81
SEC61A1-202ENST00000424880 CHATP28329 748 aa9.99□□□□□ -0.81
SEC61A1-202ENST00000424880 APOBEC1P41238 236 aaKnown RBP9.99□□□□□ -0.81
SEC61A1-202ENST00000424880 FMODQ06828 376 aa9.99□□□□□ -0.81
SEC61A1-202ENST00000424880 ZNF74Q16587 644 aa9.99□□□□□ -0.81
SEC61A1-202ENST00000424880 TMEM240Q5SV17 173 aa9.99□□□□□ -0.81
SEC61A1-202ENST00000424880 WDR25Q64LD2 544 aaPredicted RBP9.99□□□□□ -0.81
SEC61A1-202ENST00000424880 FAHD2BQ6P2I3 314 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms