RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 LIPKQ5VXJ0 399 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 SATL1Q86VE3 508 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 MOGAT3Q86VF5 341 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 BOLLQ8N9W6 283 aaKnown RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 OR52H1Q8NGJ2 320 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 OR8S1Q8NH09 359 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 ZNF420Q8TAQ5 688 aaPredicted RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 MGLLQ99685 303 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 SLC30A2Q9BRI3 323 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 PAPOLGQ9BWT3 736 aaKnown RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 OPA3Q9H6K4 179 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 DCAF16Q9NXF7 216 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 IL19Q9UHD0 177 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 PCDHB10Q9UN67 800 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 NOP16Q9Y3C1 178 aaKnown RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 WIPI2Q9Y4P8 454 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 R4GMQ9 66 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 TMEM269A0A1B0GVZ9 245 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 hCG_1807616A0A1W2PRN6 198 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 CCDC160A6NGH7 325 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 H3BSH0 61 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 MLNRO43193 412 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 ZNF254O75437 659 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 SULT1C4O75897 302 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 ZNF205O95201 554 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 CYB5R3P00387 301 aaPredicted RBP8.18□□□□□ -1.1
HERC3-204ENST00000422770 TFAP2AP05549 437 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 ADH4P08319 380 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 JUNBP17275 347 aaPredicted RBP8.18□□□□□ -1.1
HERC3-204ENST00000422770 CFL1P23528 166 aaKnown RBP8.18□□□□□ -1.1
HERC3-204ENST00000422770 TGFBR2P37173 567 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 GNALP38405 381 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 KIR3DL2P43630 455 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 RPS25P62851 125 aaKnown RBP8.18□□□□□ -1.1
HERC3-204ENST00000422770 MRPL28Q13084 256 aaKnown RBP8.18□□□□□ -1.1
HERC3-204ENST00000422770 WDR38Q5JTN6 314 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 ZNF684Q5T5D7 378 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 PRAMEF6Q5VXH4 476 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 IL17RELQ6ZVW7 336 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 ZNF676Q8N7Q3 588 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 ZNF485Q8NCK3 441 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 OR11L1Q8NGX0 322 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 TMIGD2Q96BF3 282 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 RAB39BQ96DA2 213 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 MSI2Q96DH6 328 aaKnown RBP8.18□□□□□ -1.1
HERC3-204ENST00000422770 POM121Q96HA1 1249 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 MEGF10Q96KG7 1140 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 SOX7Q9BT81 388 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 TMED9Q9BVK6 235 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 NIPAL2Q9H841 368 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 MOB1AQ9H8S9 216 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 TMEM106BQ9NUM4 274 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 ABCA1O95477 2261 aa8.18□□□□□ -1.1
HERC3-204ENST00000422770 MALRD1Q5VYJ5 2156 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 ABCA2Q9BZC7 2435 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 TRBV2A0A0J9YWF9 115 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 LOC107986453A0A1B0GWG9 222 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 LRRC30A6NM36 301 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 CCRL2O00421 344 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 LMX1BO60663 402 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 GRPP07492 148 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 CD36P16671 472 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 CELP19835 753 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 GADD45AP24522 165 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 TGM4P49221 684 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 GSK3AP49840 483 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 MMP16P51512 607 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 NANOS3P60323 173 aaKnown RBP8.17□□□□□ -1.1
HERC3-204ENST00000422770 BDH1Q02338 343 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 ALKBH1Q13686 389 aaKnown RBP8.17□□□□□ -1.1
HERC3-204ENST00000422770 SSX1Q16384 188 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 SYT6Q5T7P8 510 aaPredicted RBP8.17□□□□□ -1.1
HERC3-204ENST00000422770 RHOUQ7L0Q8 258 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 CLVS1Q8IUQ0 354 aaPredicted RBP8.17□□□□□ -1.1
HERC3-204ENST00000422770 FTMTQ8N4E7 242 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 LINC01356Q8N9X3 169 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 OR8B12Q8NGG6 310 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 OR13F1Q8NGS4 319 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 OR13C5Q8NGS8 318 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 OR2G2Q8NGZ5 317 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 TSEN15Q8WW01 171 aaKnown RBP8.17□□□□□ -1.1
HERC3-204ENST00000422770 HPS1Q92902 700 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 SGK3Q96BR1 496 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 SMIM19Q96E16 107 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 FAM71F1Q96KD3 344 aaPredicted RBP8.17□□□□□ -1.1
HERC3-204ENST00000422770 REPIN1Q9BWE0 567 aaKnown RBP8.17□□□□□ -1.1
HERC3-204ENST00000422770 SLC22A4Q9H015 551 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 COMMD4Q9H0A8 199 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 SHARPINQ9H0F6 387 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 ZNF665Q9H7R5 613 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 GCM1Q9NP62 436 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 EXOSC4Q9NPD3 245 aaKnown RBP8.17□□□□□ -1.1
HERC3-204ENST00000422770 NDUFB11Q9NX14 153 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 FAM206AQ9NX38 181 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 BABAM2Q9NXR7 383 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 OR52A1Q9UKL2 312 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 SLC22A13Q9Y226 551 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 NPTNQ9Y639 398 aa8.17□□□□□ -1.1
HERC3-204ENST00000422770 SIRT4Q9Y6E7 314 aaPredicted RBP8.17□□□□□ -1.1
HERC3-204ENST00000422770 LOC100506127A0A0U1RQW1 187 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms