RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CLDND2Q8NHS1 167 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 FBLIM1Q8WUP2 373 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 GAL3ST1Q99999 423 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 C1orf123Q9NWV4 160 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 SCN3BQ9NY72 215 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 UBAP1Q9NZ09 502 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 CNOT2Q9NZN8 540 aaKnown RBP13.29□□□□□ -0.28
BRAT1-202ENST00000421712 PCDHB10Q9UN67 800 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 A0A1B0GTI1 187 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 PTGES3LE9PB15 166 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 ZNF205O95201 554 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 NRASP01111 189 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 MYF6P23409 242 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 PMELP40967 661 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 GZMKP49863 264 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 CDH15P55291 814 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 MRPL28Q13084 256 aaKnown RBP13.28□□□□□ -0.28
BRAT1-202ENST00000421712 DMRTC1Q5HYR2 192 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 ZBTB37Q5TC79 503 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 OR2G6Q5TZ20 316 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 PLCXD3Q63HM9 321 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 CYB5R2Q6BCY4 276 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 EGFL6Q8IUX8 553 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 ZNF676Q8N7Q3 588 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 CNBD2Q96M20 576 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 JAM3Q9BX67 310 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 CLEC2DQ9UHP7 191 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 PSORS1C1Q9UIG5 152 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 CAB39Q9Y376 341 aaPredicted RBP13.28□□□□□ -0.28
BRAT1-202ENST00000421712 V9GYS6 101 aa13.28□□□□□ -0.28
BRAT1-202ENST00000421712 TANC2Q9HCD6 1990 aa13.27□□□□□ -0.28
BRAT1-202ENST00000421712 TRBV2A0A0J9YWF9 115 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 LOC107986453A0A1B0GWG9 222 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 IGHV4-31P0DP07 118 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 PIPP12273 146 aaPredicted RBP13.27□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF12P17014 697 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 IL2RGP31785 369 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 GPM6AP51674 278 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 NANOS3P60323 173 aaKnown RBP13.27□□□□□ -0.29
BRAT1-202ENST00000421712 BTG1P62324 171 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF181Q2M3W8 571 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 CLVS2Q5SYC1 327 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 FDX2Q6P4F2 183 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF826PQ6ZT77 177 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 CCDC54Q8NEL0 328 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 OR1M1Q8NGA1 313 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 GATAD2BQ8WXI9 593 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 OR5P3Q8WZ94 311 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 RNF166Q96A37 237 aaPredicted RBP13.27□□□□□ -0.29
BRAT1-202ENST00000421712 ITPKCQ96DU7 683 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF649Q9BS31 505 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 ANKRD60Q9BZ19 345 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 COMMD4Q9H0A8 199 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 YAE1D1Q9NRH1 226 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 GPR173Q9NS66 373 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 RNF7Q9UBF6 113 aa13.27□□□□□ -0.29
BRAT1-202ENST00000421712 DHRS7CA6NNS2 312 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF732B4DXR9 585 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 E9PI62 339 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 SLC1A7O00341 560 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 CD5LO43866 347 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 ABCA1O95477 2261 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 SERPINA3P01011 423 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 IGHV2-70P01814 119 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 CCDC159P0C7I6 412 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 CCL1P22362 96 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 THBS2P35442 1172 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 YLPM1P49750 1951 aaKnown RBP13.26□□□□□ -0.29
BRAT1-202ENST00000421712 CCR9P51686 369 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF154Q13106 437 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 CEACAM21Q3KPI0 293 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 FAM201AQ5SY85 155 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 DEFB108BQ8NET1 73 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 Q8TCH9 128 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 HAVCR2Q8TDQ0 301 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 MYDGFQ969H8 173 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 RAB39BQ96DA2 213 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 RAB26Q9ULW5 256 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 TPRKBQ9Y3C4 175 aa13.26□□□□□ -0.29
BRAT1-202ENST00000421712 CSPG4Q6UVK1 2322 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 PPIAL4EA0A075B759 164 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 TMEM210A6NLX4 147 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 OR4C45A6NMZ5 311 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 PPIAL4DF5H284 164 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 MYL12BO14950 172 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 LMX1BO60663 402 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 TGFAP01135 160 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 ISG15P05161 165 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 PPIAL4FP0DN26 164 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF20P17024 532 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 C21orf33P30042 268 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-202ENST00000421712 MDH2P40926 338 aaKnown RBP13.25□□□□□ -0.29
BRAT1-202ENST00000421712 GTF2A1P52655 376 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-202ENST00000421712 GNG3P63215 75 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 ZMYND11Q15326 602 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 SFRP4Q6FHJ7 346 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-202ENST00000421712 LRRC28Q86X40 367 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-202ENST00000421712 SPICQ8N5J4 248 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms