RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GFOD2Q3B7J2 385 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 STUMQ69YW2 141 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 DUX4L9Q6RFH8 374 aaPredicted RBP14.3□□□□□ -0.12
MSH6-203ENST00000420813 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.3□□□□□ -0.12
MSH6-203ENST00000420813 CMTM4Q8IZR5 234 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 FGFRL1Q8N441 504 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 FAM216BQ8N7L0 139 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 C8orf46Q8TAG6 207 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 NPRL2Q8WTW4 380 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 LRGUKQ96M69 825 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 OR51V1Q9H2C8 321 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 PPP1R3EQ9H7J1 279 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.3□□□□□ -0.12
MSH6-203ENST00000420813 DUX4Q9UBX2 424 aa14.3□□□□□ -0.12
MSH6-203ENST00000420813 CAB39Q9Y376 341 aaPredicted RBP14.3□□□□□ -0.12
MSH6-203ENST00000420813 PRR23D1E9PI22 279 aaPredicted RBP14.29□□□□□ -0.12
MSH6-203ENST00000420813 ACOT8O14734 319 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 PRODHO43272 600 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 GPR137BO60478 399 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 CST4P01036 141 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 CST1P01037 141 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 IGHV4-59P01825 116 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 PRR23D2P0DMB1 279 aaPredicted RBP14.29□□□□□ -0.12
MSH6-203ENST00000420813 HOXB6P17509 224 aaKnown RBP14.29□□□□□ -0.12
MSH6-203ENST00000420813 PSMA6P60900 246 aaKnown RBP14.29□□□□□ -0.12
MSH6-203ENST00000420813 ELF3P78545 371 aaPredicted RBP14.29□□□□□ -0.12
MSH6-203ENST00000420813 PRDX4Q13162 271 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 LRRC10Q5BKY1 277 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 FAM76BQ5HYJ3 339 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 LRTOMTQ8WZ04 291 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 OR5P3Q8WZ94 311 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 DCTN5Q9BTE1 182 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 CHID1Q9BWS9 393 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 DPAGT1Q9H3H5 408 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 NIPAL2Q9H841 368 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 HAO2Q9NYQ3 351 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 ONECUT1Q9UBC0 465 aa14.29□□□□□ -0.12
MSH6-203ENST00000420813 VWFP04275 2813 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 NKX6-3A6NJ46 265 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 HMGN1P05114 100 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 AMY2BP19961 511 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 ACKR3P25106 362 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 GUCA2AQ02747 115 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 SRSF4Q08170 494 aaKnown RBP14.28□□□□□ -0.12
MSH6-203ENST00000420813 PLBD1Q6P4A8 553 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 BRICD5Q6PL45 260 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 GDPGP1Q6ZNW5 385 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 ADGRG5Q8IZF4 528 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 THEM6Q8WUY1 208 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 ITFG2Q969R8 447 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 SEH1LQ96EE3 360 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 RAB3IPQ96QF0 476 aaPredicted RBP14.28□□□□□ -0.12
MSH6-203ENST00000420813 CCT8L2Q96SF2 557 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 PKP2Q99959 881 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 PDP1Q9P0J1 537 aaPredicted RBP14.28□□□□□ -0.12
MSH6-203ENST00000420813 DNAJB11Q9UBS4 358 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 FAM96BQ9Y3D0 163 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 RNF114Q9Y508 228 aa14.28□□□□□ -0.12
MSH6-203ENST00000420813 NOTCH1P46531 2555 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 ZNF850A8MQ14 1090 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 TIMM23O14925 209 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 SELENOFO60613 162 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 CLPXO76031 633 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 FBP1P09467 338 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 IKZF1Q13422 519 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 GINS1Q14691 196 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 SLC35D3Q5M8T2 416 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 ZNF788Q6ZQV5 615 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 C1orf122Q6ZSJ8 110 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 KRT74Q7RTS7 529 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 PDZD9Q8IXQ8 264 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 LINC01006Q8NI28 216 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 RPL3LQ92901 407 aaKnown RBP14.27□□□□□ -0.13
MSH6-203ENST00000420813 CCDC124Q96CT7 223 aaKnown RBP14.27□□□□□ -0.13
MSH6-203ENST00000420813 MED30Q96HR3 178 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 C1orf21Q9H246 121 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 ZNRD1Q9P1U0 126 aa14.27□□□□□ -0.13
MSH6-203ENST00000420813 CMYA5Q8N3K9 4069 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 AQP12BA6NM10 295 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 M0QZ24 198 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 GNGT2O14610 69 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 T-ENOLP0DO92 83 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 OSMP13725 252 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 EEF1B2P24534 225 aaKnown RBP14.26□□□□□ -0.13
MSH6-203ENST00000420813 POU1F1P28069 291 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 DCTDP32321 178 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 CDK5Q00535 292 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 DEFA6Q01524 100 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 PDLIM3Q53GG5 364 aaPredicted RBP14.26□□□□□ -0.13
MSH6-203ENST00000420813 TMEM179BQ7Z7N9 219 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 AQP12AQ8IXF9 295 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 ZDHHC23Q8IYP9 409 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 Q8N7P7 452 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 OR5T2Q8NGG2 359 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 OR8B12Q8NGG6 310 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 ANGPTL6Q8NI99 470 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 HPSE2Q8WWQ2 592 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 PIGCQ92535 297 aa14.26□□□□□ -0.13
MSH6-203ENST00000420813 RNF170Q96K19 258 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms