RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 ZNF420Q8TAQ5 688 aaPredicted RBP17.41■□□□□ 0.38
HMGXB4-203ENST00000420166 ERGIC1Q969X5 290 aa17.41■□□□□ 0.38
HMGXB4-203ENST00000420166 TIMD4Q96H15 378 aa17.41■□□□□ 0.38
HMGXB4-203ENST00000420166 SCN3BQ9NY72 215 aa17.41■□□□□ 0.38
HMGXB4-203ENST00000420166 WIPI2Q9Y4P8 454 aa17.41■□□□□ 0.38
HMGXB4-203ENST00000420166 H3BSH0 61 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 ISG15P05161 165 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 CCDC159P0C7I6 412 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 C21orf33P30042 268 aaPredicted RBP17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 PMELP40967 661 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 ZNF181Q2M3W8 571 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 AVPI1Q5T686 147 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 Q8TCH9 128 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 HPSE2Q8WWQ2 592 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 OR5P3Q8WZ94 311 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 RAB1CQ92928 201 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 MICU1Q9BPX6 476 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 RTL8AQ9BWD3 113 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 FN3KRPQ9HA64 309 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 UFSP2Q9NUQ7 469 aa17.4■□□□□ 0.38
HMGXB4-203ENST00000420166 ABCA2Q9BZC7 2435 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 PTGES3LE9PB15 166 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 TMEM178BH3BS89 294 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 GRPP07492 148 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 CHN2P52757 468 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 TMEM42Q69YG0 159 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 PEG10Q86TG7 708 aaKnown RBP17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 WDR86Q86TI4 376 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 BIVMQ86UB2 503 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 ZNF676Q8N7Q3 588 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 ZNF485Q8NCK3 441 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 OR11L1Q8NGX0 322 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 MYDGFQ969H8 173 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 FGF23Q9GZV9 251 aaPredicted RBP17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 Q9H521 79 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 PAK1IP1Q9NWT1 392 aaPredicted RBP17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 TPRKBQ9Y3C4 175 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 NPTNQ9Y639 398 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 MTORP42345 2549 aa17.39■□□□□ 0.37
HMGXB4-203ENST00000420166 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.38■□□□□ 0.378e-15■■■■□ 21.1
HMGXB4-203ENST00000420166 LRP5LA4QPB2 252 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 A6NLC8 198 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 TMEM212A6NML5 194 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 WNT9BO14905 357 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 LMX1BO60663 402 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 NRASP01111 189 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 CDK1P06493 297 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 ZNF12P17014 697 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 THBS2P35442 1172 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 GTF2A1P52655 376 aaPredicted RBP17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 CDH15P55291 814 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 SLC35A2P78381 396 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 CCDC58Q4VC31 144 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 CLVS2Q5SYC1 327 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 XAF1Q6GPH4 301 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 MOB3CQ70IA8 216 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 OR1M1Q8NGA1 313 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 HPS1Q92902 700 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 HIST1H2AAQ96QV6 131 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 SMR3AQ99954 134 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 RASSF4Q9H2L5 321 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 NARFLQ9H6Q4 476 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 PLEKHA1Q9HB21 404 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 BABAM2Q9NXR7 383 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 HHLA2Q9UM44 414 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 PCDHGB5Q9Y5G0 923 aa17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 ZNF469Q96JG9 3925 aaPredicted RBP17.38■□□□□ 0.37
HMGXB4-203ENST00000420166 LRRC30A6NM36 301 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 MYL12BO14950 172 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 ZFPL1O95159 310 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 CYB5R3P00387 301 aaPredicted RBP17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 IGHV2-70P01814 119 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 ZNF154Q13106 437 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 CDK5R1Q15078 307 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 TMEM249Q2WGJ8 235 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 CEACAM21Q3KPI0 293 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 CEP78Q5JTW2 689 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 PLCXD3Q63HM9 321 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 RPL22L1Q6P5R6 122 aaKnown RBP17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 LURAP1LQ8IV03 231 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 C1orf87Q8N0U7 546 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 OR10AC1Q8NH08 325 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 OR5AK2Q8NH90 309 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 CLDND2Q8NHS1 167 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 RPS4Y2Q8TD47 263 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 GATAD2BQ8WXI9 593 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 SGCDQ92629 289 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 RNF170Q96K19 258 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 PDCD1LG2Q9BQ51 273 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 COMMD4Q9H0A8 199 aa17.37■□□□□ 0.37
HMGXB4-203ENST00000420166 TRBV2A0A0J9YWF9 115 aa17.36■□□□□ 0.37
HMGXB4-203ENST00000420166 A6NIN4 97 aa17.36■□□□□ 0.37
HMGXB4-203ENST00000420166 TMEM210A6NLX4 147 aa17.36■□□□□ 0.37
HMGXB4-203ENST00000420166 DENRO43583 198 aaKnown RBP17.36■□□□□ 0.37
HMGXB4-203ENST00000420166 LALBAP00709 142 aa17.36■□□□□ 0.37
HMGXB4-203ENST00000420166 IRF2P14316 349 aa17.36■□□□□ 0.37
HMGXB4-203ENST00000420166 CRHBPP24387 322 aa17.36■□□□□ 0.37
HMGXB4-203ENST00000420166 BTG1P62324 171 aa17.36■□□□□ 0.37
HMGXB4-203ENST00000420166 KRTAP1-1Q07627 177 aa17.36■□□□□ 0.37
HMGXB4-203ENST00000420166 RNLSQ5VYX0 342 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms