RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 FCAMRQ8WWV6 532 aa18.14■□□□□ 0.49
GPC1-202ENST00000420138 ZNF486Q96H40 463 aaPredicted RBP18.14■□□□□ 0.49
GPC1-202ENST00000420138 SLX1AQ9BQ83 275 aa18.14■□□□□ 0.49
GPC1-202ENST00000420138 FIGNL2A6NMB9 653 aa18.13■□□□□ 0.49
GPC1-202ENST00000420138 DHFRP00374 187 aa18.13■□□□□ 0.49
GPC1-202ENST00000420138 NGFP01138 241 aa18.13■□□□□ 0.49
GPC1-202ENST00000420138 ZNF14P17017 642 aaPredicted RBP18.13■□□□□ 0.49
GPC1-202ENST00000420138 WNT5AP41221 380 aa18.13■□□□□ 0.49
GPC1-202ENST00000420138 PER3P56645 1201 aa18.13■□□□□ 0.49
GPC1-202ENST00000420138 MYPOPQ86VE0 399 aaPredicted RBP18.13■□□□□ 0.49
GPC1-202ENST00000420138 OR52I2Q8NH67 350 aa18.13■□□□□ 0.49
GPC1-202ENST00000420138 NPRL2Q8WTW4 380 aa18.13■□□□□ 0.49
GPC1-202ENST00000420138 AKAP1Q92667 903 aaKnown RBP eCLIP18.13■□□□□ 0.49
GPC1-202ENST00000420138 REPIN1Q9BWE0 567 aaKnown RBP18.13■□□□□ 0.49
GPC1-202ENST00000420138 ATG5Q9H1Y0 275 aa18.13■□□□□ 0.49
GPC1-202ENST00000420138 OPN3Q9H1Y3 402 aaPredicted RBP18.13■□□□□ 0.49
GPC1-202ENST00000420138 RANGRFQ9HD47 186 aaPredicted RBP18.13■□□□□ 0.49
GPC1-202ENST00000420138 FBLN5Q9UBX5 448 aa18.13■□□□□ 0.49
GPC1-202ENST00000420138 A0A1W2PR80 420 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 TMEM14DPA8MWL7 114 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 TCRBP04435 133 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 CRHP06850 196 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 RAB6AP20340 208 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 GIFP27352 417 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 TIMP3P35625 211 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 CAPZA1P52907 286 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 AP3S2P59780 193 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 KISS1Q15726 138 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 C3P1Q6ZMU1 363 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 ZNF101Q8IZC7 436 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 APOBEC3DQ96AK3 386 aaPredicted RBP18.12■□□□□ 0.49
GPC1-202ENST00000420138 SNRNP40Q96DI7 357 aaKnown RBP18.12■□□□□ 0.49
GPC1-202ENST00000420138 DMRTB1Q96MA1 342 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 CACNG6Q9BXT2 260 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 GPR173Q9NS66 373 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 STARD10Q9Y365 291 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 RBMX2Q9Y388 322 aaKnown RBP18.12■□□□□ 0.49
GPC1-202ENST00000420138 GMDSO60547 372 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 RAB25P57735 213 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 RRAS2P62070 204 aaPredicted RBP18.12■□□□□ 0.49
GPC1-202ENST00000420138 PMPCAQ10713 525 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 GK2Q14410 553 aaPredicted RBP18.12■□□□□ 0.49
GPC1-202ENST00000420138 AWAT2Q6E213 333 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 CCDC36Q8IYA8 594 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 WDR31Q8NA23 367 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 C1orf162Q8NEQ5 155 aaPredicted RBP18.12■□□□□ 0.49
GPC1-202ENST00000420138 POFUT1Q9H488 388 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 DIABLOQ9NR28 239 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 NUDT15Q9NV35 164 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 PROCRQ9UNN8 238 aa18.12■□□□□ 0.49
GPC1-202ENST00000420138 MRPS28Q9Y2Q9 187 aaKnown RBP18.12■□□□□ 0.49
GPC1-202ENST00000420138 WIPF3A6NGB9 483 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 CELA3BP08861 270 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 APLNRP35414 380 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 CD83Q01151 205 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 KLRB1Q12918 225 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 MOGAT2Q3SYC2 334 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 PRR30Q53SZ7 412 aaPredicted RBP18.11■□□□□ 0.49
GPC1-202ENST00000420138 GLIPR1L1Q6UWM5 242 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 C1QL2Q7Z5L3 287 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 SLC30A7Q8NEW0 376 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 RAB22AQ9UL26 194 aa18.11■□□□□ 0.49
GPC1-202ENST00000420138 TRAV6A0A075B6T7 132 aa18.1■□□□□ 0.49
GPC1-202ENST00000420138 MT-ND4P03905 459 aa18.1■□□□□ 0.49
GPC1-202ENST00000420138 GSTT2BP0CG30 244 aa18.1■□□□□ 0.49
GPC1-202ENST00000420138 NAT2P11245 290 aa18.1■□□□□ 0.49
GPC1-202ENST00000420138 HOXB1P14653 301 aaPredicted RBP18.1■□□□□ 0.49
GPC1-202ENST00000420138 CEACAM8P31997 349 aaPredicted RBP18.1■□□□□ 0.49
GPC1-202ENST00000420138 UBE2NP61088 152 aaKnown RBP18.1■□□□□ 0.49
GPC1-202ENST00000420138 PIGTQ969N2 578 aa18.1■□□□□ 0.49
GPC1-202ENST00000420138 FYTTD1Q96QD9 318 aaKnown RBP18.1■□□□□ 0.49
GPC1-202ENST00000420138 GAL3ST1Q99999 423 aa18.1■□□□□ 0.49
GPC1-202ENST00000420138 ASF1BQ9NVP2 202 aa18.1■□□□□ 0.49
GPC1-202ENST00000420138 KLK11Q9UBX7 282 aa18.1■□□□□ 0.49
GPC1-202ENST00000420138 TRAV18A0A075B6X5 111 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 NAP1L6A6NFF2 107 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 ALDH3B1P43353 468 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 CLVS2Q5SYC1 327 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 CXorf67Q86X51 503 aaPredicted RBP18.09■□□□□ 0.49
GPC1-202ENST00000420138 TCTE3Q8IZS6 198 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 TMEM104Q8NE00 496 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 BEX2Q9BXY8 128 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 IGKV1-27A0A075B6S5 117 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 RAB27BO00194 218 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 HOXD4P09016 255 aaPredicted RBP18.09■□□□□ 0.49
GPC1-202ENST00000420138 PTGFRP43088 359 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 CCR6P51684 374 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 RAG2P55895 527 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 HLXQ14774 488 aaPredicted RBP18.09■□□□□ 0.49
GPC1-202ENST00000420138 EIF2S3LQ2VIR3 472 aaKnown RBP18.09■□□□□ 0.49
GPC1-202ENST00000420138 BTN2A1Q7KYR7 527 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 DOLPP1Q86YN1 238 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 OR5D18Q8NGL1 313 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 FAM46BQ96A09 425 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 SPSB1Q96BD6 273 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 HRASLSQ9HDD0 168 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 CRIM1Q9NZV1 1036 aa18.09■□□□□ 0.49
GPC1-202ENST00000420138 A0A0A6YYH2 397 aa18.08■□□□□ 0.48
GPC1-202ENST00000420138 A0A0A6YYJ9 748 aa18.08■□□□□ 0.48
GPC1-202ENST00000420138 A0A1W2PP11 408 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms