RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ZNF582Q96NG8 517 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 INTS14Q96SY0 518 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 COPS4Q9BT78 406 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 ALG8Q9BVK2 526 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 GABARAPL1Q9H0R8 117 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 OR51V1Q9H2C8 321 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 MARCH7Q9H992 704 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 PAPOLBQ9NRJ5 636 aaKnown RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 TREM2Q9NZC2 230 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 LPAR3Q9UBY5 353 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 WIPI2Q9Y4P8 454 aa5.83□□□□□ -1.48
HMGN1-205ENST00000419378 FBN1P35555 2871 aaKnown RBP5.83□□□□□ -1.48
HMGN1-205ENST00000419378 C5orf63A6NC05 138 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 B4DSR2 109 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 G3V2T6 193 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 MLNRO43193 412 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 SELENOFO60613 162 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 MITFO75030 526 aaPredicted RBP5.82□□□□□ -1.48
HMGN1-205ENST00000419378 CIB2O75838 187 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 HMGN1P05114 100 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 FAM157CP0CG43 387 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 SLC2A1P11166 492 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 FCGR1AP12314 374 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 TNFRSF1AP19438 455 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 FASP25445 335 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 CX3CR1P49238 355 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 DAPP51397 102 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 PRKXP51817 358 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 CRISP1P54107 249 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 DVL1P1P54792 670 aaPredicted RBP5.82□□□□□ -1.48
HMGN1-205ENST00000419378 LMO4P61968 165 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 ESRRGP62508 458 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 GRB2P62993 217 aaKnown RBP5.82□□□□□ -1.48
HMGN1-205ENST00000419378 SLC3A1Q07837 685 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 EIF2B1Q14232 305 aaKnown RBP5.82□□□□□ -1.48
HMGN1-205ENST00000419378 TAF13Q15543 124 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 KLHL12Q53G59 568 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 GLYATL3Q5SZD4 288 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 FAM120AOSQ5T036 256 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 TMEM236Q5W0B7 351 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 DRAM2Q6UX65 266 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 IL17RELQ6ZVW7 336 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 PGAP1Q75T13 922 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 MRPL21Q7Z2W9 205 aaKnown RBP5.82□□□□□ -1.48
HMGN1-205ENST00000419378 DPY19L4Q7Z388 723 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 CPOQ8IVL8 374 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 TIGD4Q8IY51 512 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF283Q8N7M2 679 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 BBS1Q8NFJ9 593 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 OR6N2Q8NGY6 317 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 OR2AE1Q8NHA4 323 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 OR5K1Q8NHB7 308 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 RNF133Q8WVZ7 376 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 RAB1CQ92928 201 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 RFKQ969G6 155 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 ZMYND19Q96E35 227 aaPredicted RBP5.82□□□□□ -1.48
HMGN1-205ENST00000419378 PLEKHA8Q96JA3 519 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 OR2V2Q96R30 315 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 AMELYQ99218 206 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 SLC30A2Q9BRI3 323 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 ABHD6Q9BV23 337 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF747Q9BV97 191 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 TEX12Q9BXU0 123 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 BEX2Q9BXY8 128 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 SHARPINQ9H0F6 387 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF665Q9H7R5 613 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 LPAR2Q9HBW0 351 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 CENPMQ9NSP4 180 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 TMEM106BQ9NUM4 274 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 DCAF16Q9NXF7 216 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 IL19Q9UHD0 177 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 AP4S1Q9Y587 144 aa5.82□□□□□ -1.48
HMGN1-205ENST00000419378 COL6A5A8TX70 2615 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 IGHV3-64DA0A0J9YX35 117 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 A0A1B0GWJ7 208 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 ISPDA4D126 451 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 F5H5P2 479 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 H0YL77 283 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 MPPED1O15442 326 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 IGHV2-70P01814 119 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 IGHV2-5P01817 119 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 MSMBP08118 114 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 HKR1P10072 659 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 SELEP16581 610 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 HNF1AP20823 631 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 PCMT1P22061 227 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 SLC2A5P22732 501 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 HSD11B1P28845 292 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 RBMXP38159 391 aaKnown RBP5.81□□□□□ -1.48
HMGN1-205ENST00000419378 OPRL1P41146 370 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 NAA10P41227 235 aaPredicted RBP5.81□□□□□ -1.48
HMGN1-205ENST00000419378 SLC15A1P46059 708 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 BTG1P62324 171 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 BLOC1S1P78537 153 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF92Q03936 586 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 PTGES3Q15185 160 aaKnown RBP5.81□□□□□ -1.48
HMGN1-205ENST00000419378 SNAPC1Q16533 368 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms