RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PTGDSP41222 190 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 TMEM50BP56557 158 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 RTL6Q6ICC9 239 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 RTN4RL2Q86UN3 420 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 OR1S2Q8NGQ3 325 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 MRGPRFQ96AM1 343 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ZNF799Q96GE5 643 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 C5orf66Q9H5L9 145 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ACKR4Q9NPB9 350 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 HPF1Q9NWY4 346 aa10.31□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 VCANP13611 3396 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 A0A0A6YYD4 124 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SERPINE3A8MV23 424 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 IFNA21P01568 189 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 AKR1C2P52895 323 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 AKR1C1Q04828 323 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 TFAP2EQ6VUC0 442 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 OR5AP2Q8NGF4 316 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 OR14K1Q8NGZ2 314 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ZNF775Q96BV0 537 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PIK3IP1Q96FE7 263 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 CPNE2Q96FN4 548 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 OCSTAMPQ9BR26 566 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 CDK2AP1O14519 115 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 DHHO43323 396 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SSR4P51571 173 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 MTCP1P56278 107 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 UQCC3Q6UW78 93 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 Q7L0L9 218 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SPAG16Q8N0X2 631 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 EMG1Q92979 244 aaKnown RBP10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 NKX6-2Q9C056 277 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 OCIAD1Q9NX40 245 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PRR13Q9NZ81 148 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 OR5H15A6NDH6 313 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ZNF705EA8MWA4 302 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 MFNGO00587 321 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 GLRA1P23415 457 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 RSU1Q15404 277 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 EXT1Q16394 746 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 KCNMB1Q16558 191 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SULF2Q8IWU5 870 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 MAML2Q8IZL2 1156 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SVBPQ8N300 66 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 AKIRIN1Q9H9L7 192 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PCDHB16Q9NRJ7 776 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 FER1L5A0AVI2 2057 aa10.3□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 F8W036 122 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SIGLEC5O15389 551 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 KLK2P20151 261 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 P2RY4P51582 365 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 BLOC1S1P78537 153 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SIGLEC14Q08ET2 396 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 LCN10Q6JVE6 187 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SGPP2Q8IWX5 399 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 AIFM2Q9BRQ8 373 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SIT1Q9Y3P8 196 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 NUP210LQ5VU65 1888 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PHF3Q92576 2039 aaKnown RBP10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 RAD51DO75771 328 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 CCL1P22362 96 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 C2orf50Q96LR7 162 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 CHCHD2Q9Y6H1 151 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 IGKV1-9A0A0C4DH69 117 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 RAB19A4D1S5 217 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 GJE1A6NN92 205 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 DSCR4P56555 118 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 SHBQ15464 509 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PRSS54Q6PEW0 395 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ZNF385AQ96PM9 386 aaKnown RBP10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 FN3KRPQ9HA64 309 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PNRC2Q9NPJ4 139 aaKnown RBP10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 FSCN3Q9NQT6 498 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 C1orf123Q9NWV4 160 aa10.29□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 LOC102725191A0A1B0GVB3 256 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 FAM230AA0A1W2PPH8 454 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ZNF850A8MQ14 1090 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 TOR1AO14656 332 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PRF1P14222 555 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 NAT1P18440 290 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ZNF169Q14929 603 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 HLA-BQ31612 363 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 RPS19BP1Q86WX3 136 aaKnown RBP10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 FADS6Q8N9I5 356 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 NAXEQ8NCW5 288 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 AGBL5Q8NDL9 886 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 OR52H1Q8NGJ2 320 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 OR13G1Q8NGZ3 307 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 RNF138Q8WVD3 245 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 PECRQ9BY49 303 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 NSG1A0A0A6YYJ2 146 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 A0A0U1RQV5 110 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 FIGNL2A6NMB9 653 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 IFNA2P01563 188 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 LCATP04180 440 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 CELA2AP08217 269 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ZNF17P17021 662 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ZNF133P52736 654 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 IL11RAQ14626 422 aa10.28□□□□□ -0.76
CSPG4P3Y-201ENST00000418188 ABCA11PQ4W5N1 156 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms