RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CHRM2P08172 466 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 SRP19P09132 144 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 SELPP16109 830 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 KLK2P20151 261 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNF117Q03924 483 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 EGR4Q05215 589 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 SQSTM1Q13501 440 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNHIT3Q15649 155 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 C1QL3Q5VWW1 255 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM183AQ8IXX5 376 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 GPR137CQ8N3F9 429 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC22A24Q8N4F4 322 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 OR52N4Q8NGI2 321 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 EMG1Q92979 244 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 NICN1Q9BSH3 213 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 FOXD3Q9UJU5 478 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 DOCK9Q9BZ29 2069 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 A0A1W2PQ45 241 aaPredicted RBP7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 A0A1W2PQY0 241 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 E5RGE8 158 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 PTGER4P35408 488 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 RBMXP38159 391 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 EMP2P54851 167 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 WBP2NLQ6ICG8 309 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 MARCH3Q86UD3 253 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNF429Q86V71 674 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEFF1Q8IYR6 380 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 TVP23CQ96ET8 276 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 SNX22Q96L94 193 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 CERS4Q9HA82 394 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 G6PC2Q9NQR9 355 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 B3GALT5Q9Y2C3 310 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 NSG2Q9Y328 171 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 FREM3P0C091 2139 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 MUC22E2RYF6 1773 aaPredicted RBP7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 MED19A0JLT2 244 aaPredicted RBP7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 GPR89AB7ZAQ6 455 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 FTCDNL1E5RQL4 147 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 CYR61O00622 381 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 GPR89BP0CG08 455 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNF10P21506 573 aaPredicted RBP7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 APLNRP35414 380 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 PLAC9Q5JTB6 97 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 LCN10Q6JVE6 187 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 FBXO42Q6P3S6 717 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 DGAT2L6Q6ZPD8 337 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 C1orf87Q8N0U7 546 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 PLPP5Q8NEB5 264 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 OR8G5Q8NG78 346 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 OR4C3Q8NH37 302 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 OR52N5Q8NH56 324 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM106CQ9BVX2 250 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 MMACHCQ9Y4U1 282 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 C2orf16Q68DN1 1984 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 A0A0A6YYD4 124 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 OR6A2O95222 327 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 CRYABP02511 175 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 AMBPP02760 352 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 HIST1H1DP16402 221 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNF25P17030 456 aaPredicted RBP7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 RND3P61587 244 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 COX15Q7KZN9 410 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC35E3Q7Z769 313 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 NAXEQ8NCW5 288 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 SHDQ96IW2 340 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 OR2A5Q96R48 311 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 NIPSNAP3BQ9BS92 247 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 LPAR5Q9H1C0 372 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 LRIT1Q9P2V4 623 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 OR52A1Q9UKL2 312 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC5A6Q9Y289 635 aa7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 ARID1BQ8NFD5 2236 aaPredicted RBP7.1□□□□□ -1.27
HMGXB4-202ENST00000418170 A8MVM7 634 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 CDRT15L2A8MXV6 281 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 STMND1H3BQB6 276 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 XKRYO14609 159 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 GPR137BO60478 399 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 PGA4P0DJD7 388 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 PGA5P0DJD9 388 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 CCR2P41597 374 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 CCL20P78556 96 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 ZP2Q05996 745 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 PPA1Q15181 289 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 C4orf17Q53FE4 359 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 GPR157Q5UAW9 335 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM182Q6ZP80 229 aaPredicted RBP7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 SGPP2Q8IWX5 399 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNF440Q8IYI8 595 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 OR10J5Q8NHC4 309 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC25A36Q96CQ1 311 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 CAPNS2Q96L46 248 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 GPR87Q9BY21 358 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 PILRAQ9UKJ1 303 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 SRPK3Q9UPE1 567 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 SPACA6W5XKT8 324 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 IFNA21P01568 189 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 AMY2BP19961 511 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 AKT2P31751 481 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 OR3A2P47893 321 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 PLXDC2Q6UX71 529 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms