RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 FAM72CH0Y354 149 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 SLC17A2O00624 439 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 ICOSLGO75144 302 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 GNG4P50150 75 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 CTBSQ01459 385 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 PNLIPRP3Q17RR3 467 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 FAM72AQ5TYM5 149 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 FAM72DQ6L9T8 149 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 FAM72BQ86X60 149 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 VRK2Q86Y07 508 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 ARHGEF39Q8N4T4 335 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 ACVR1CQ8NER5 493 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 NEURL3Q96EH8 262 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 OR1F2PQ96R84 312 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 OR6C1Q96RD1 312 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 ULBP3Q9BZM4 244 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 LAMTOR2Q9Y2Q5 125 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 UQCRFS1P47985 274 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 DLX2Q07687 328 aaPredicted RBP9.32□□□□□ -0.92
SATB1-204ENST00000417717 SNAI3Q3KNW1 292 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 TMEM255AQ5JRV8 349 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 IER5LQ5T953 404 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 MRPL21Q7Z2W9 205 aaKnown RBP9.32□□□□□ -0.92
SATB1-204ENST00000417717 MRPL52Q86TS9 123 aaKnown RBP9.32□□□□□ -0.92
SATB1-204ENST00000417717 LRRC15Q8TF66 581 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 C2orf15Q8WU43 125 aaKnown RBP9.32□□□□□ -0.92
SATB1-204ENST00000417717 CLEC4DQ8WXI8 215 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 TEX37Q96LM6 180 aa9.32□□□□□ -0.92
SATB1-204ENST00000417717 A0A1B0GW15 77 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 MANSC4A6NHS7 340 aaPredicted RBP9.31□□□□□ -0.92
SATB1-204ENST00000417717 MPPED1O15442 326 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 SMPD2O60906 423 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 HOXA6P31267 233 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 MVDP53602 400 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 TAZQ16635 292 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 TMEM136Q6ZRR5 245 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 LIPHQ8WWY8 451 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 DDIT4LQ96D03 193 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 ORAI1Q96D31 301 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 RAB40CQ96S21 281 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 ZPBPQ9BS86 351 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 HAPLN2Q9GZV7 340 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 LOC102725191A0A1B0GVB3 256 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 SIRPB1O00241 398 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 GLRA1P23415 457 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 RIPPLY3P57055 190 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 DEFB134Q4QY38 66 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 C15orf39Q6ZRI6 1047 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 OR1L6Q8NGR2 347 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 OR5C1Q8NGR4 320 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 SLC6A18Q96N87 628 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 TUBA4BQ9H853 241 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 DNMT3BQ9UBC3 853 aaKnown RBP9.31□□□□□ -0.92
SATB1-204ENST00000417717 H3BMH7 237 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 SDCBPO00560 298 aaPredicted RBP9.31□□□□□ -0.92
SATB1-204ENST00000417717 VAMP5O95183 116 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 PRSS1P07477 247 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 OR4Q2P0C623 313 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 PLGLAQ15195 96 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 HTR3DQ70Z44 454 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 ADAMTS18Q8TE60 1221 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 LPPQ93052 612 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 SLAMF6Q96DU3 332 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 ZNF558Q96NG5 402 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 GLIS2Q9BZE0 524 aaPredicted RBP9.31□□□□□ -0.92
SATB1-204ENST00000417717 SSUH2Q9Y2M2 353 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 EMC9Q9Y3B6 208 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 LY75O60449 1722 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 OR1D2P34982 312 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 SUB1P53999 127 aaKnown RBP eCLIP9.31□□□□□ -0.92
SATB1-204ENST00000417717 BPIFB3P59826 476 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 RPS15AP62244 130 aaKnown RBP9.31□□□□□ -0.92
SATB1-204ENST00000417717 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 ZNF506Q5JVG8 444 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 WBP2NLQ6ICG8 309 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 H2BFWTQ7Z2G1 175 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 OR11L1Q8NGX0 322 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 MAGT1Q9H0U3 335 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 SLC26A1Q9H2B4 701 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 C5AR2Q9P296 337 aa9.31□□□□□ -0.92
SATB1-204ENST00000417717 MYH1P12882 1939 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 SLC5A10A0PJK1 596 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 C19orf67A6NJJ6 358 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 IGHEP01854 428 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 GAPDHP04406 335 aaKnown RBP9.3□□□□□ -0.92
SATB1-204ENST00000417717 COX6CP09669 75 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 WDR92Q96MX6 357 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 LINC00597Q9H2U6 94 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 NUMA1Q14980 2115 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 A0A087WUU8 490 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 CLEC18AA5D8T8 446 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 NXPH3O95157 252 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 POU2F2P09086 479 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 GLI4P10075 376 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 ARSAP15289 507 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 MLF2Q15773 248 aaPredicted RBP9.3□□□□□ -0.92
SATB1-204ENST00000417717 NPSR1Q6W5P4 371 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 CLEC18CQ8NCF0 446 aa9.3□□□□□ -0.92
SATB1-204ENST00000417717 PTPMT1Q8WUK0 201 aaPredicted RBP9.3□□□□□ -0.92
SATB1-204ENST00000417717 SHISA4Q96DD7 197 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms