RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 MBD3L4A6NDZ8 208 aaPredicted RBP14.55□□□□□ -0.08
SSBP3-205ENST00000417664 MBD3L3A6NE82 208 aaPredicted RBP14.55□□□□□ -0.08
SSBP3-205ENST00000417664 MBD3L5A6NJ08 208 aaPredicted RBP14.55□□□□□ -0.08
SSBP3-205ENST00000417664 K7ENP7 123 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 RRP8O43159 456 aaKnown RBP14.55□□□□□ -0.08
SSBP3-205ENST00000417664 WDR1O75083 606 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 WISP2O76076 250 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 MPIG6BO95866 241 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 H2AFB2P0C5Z0 115 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 IGHV1-2P23083 117 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 RCVRNP35243 200 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 VEGFCP49767 419 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 CCR6P51684 374 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 FUT6P51993 359 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 MTCP1P56278 107 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 UBE2NP61088 152 aaKnown RBP14.55□□□□□ -0.08
SSBP3-205ENST00000417664 CDNFQ49AH0 187 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 HIKESHIQ53FT3 197 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 INO80CQ6PI98 192 aaPredicted RBP14.55□□□□□ -0.08
SSBP3-205ENST00000417664 Q6ZTK2 550 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 GCNT2Q8N0V5 402 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 FAM89BQ8N5H3 189 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 CSNK2A3Q8NEV1 391 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 OR5L1Q8NGL2 311 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 MBD3L2Q8NHZ7 208 aaPredicted RBP14.55□□□□□ -0.08
SSBP3-205ENST00000417664 BORCS8Q96FH0 119 aa14.55□□□□□ -0.08
SSBP3-205ENST00000417664 MRPL15Q9P015 296 aaKnown RBP14.55□□□□□ -0.08
SSBP3-205ENST00000417664 PRAF2O60831 178 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 ZNF780AO75290 641 aaPredicted RBP14.54□□□□□ -0.08
SSBP3-205ENST00000417664 CRTAPO75718 401 aaPredicted RBP14.54□□□□□ -0.08
SSBP3-205ENST00000417664 CYB5AP00167 134 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 HOXD4P09016 255 aaPredicted RBP14.54□□□□□ -0.08
SSBP3-205ENST00000417664 GTF2F2P13984 249 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 COX5AP20674 150 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 CCNOP22674 350 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 EIF2B2P49770 351 aaKnown RBP14.54□□□□□ -0.08
SSBP3-205ENST00000417664 RAB25P57735 213 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 RPS27AP62979 156 aaKnown RBP14.54□□□□□ -0.08
SSBP3-205ENST00000417664 GUCA2AQ02747 115 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 CD300CQ08708 224 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 MRPL49Q13405 166 aaKnown RBP14.54□□□□□ -0.08
SSBP3-205ENST00000417664 MRPL21Q7Z2W9 205 aaKnown RBP14.54□□□□□ -0.08
SSBP3-205ENST00000417664 RNF144BQ7Z419 303 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 ZNF584Q8IVC4 421 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 CNEP1R1Q8N9A8 125 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 CHST4Q8NCG5 386 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 TMEM104Q8NE00 496 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 NPRL2Q8WTW4 380 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 ZNF75AQ96N20 296 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 GAL3ST1Q99999 423 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 MCUBQ9NWR8 336 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 ZNF221Q9UK13 617 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 ING4Q9UNL4 249 aa14.54□□□□□ -0.08
SSBP3-205ENST00000417664 ATP1B3P54709 279 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 ZP1P60852 638 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 GK2Q14410 553 aaPredicted RBP14.53□□□□□ -0.08
SSBP3-205ENST00000417664 PNLIPRP3Q17RR3 467 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 PLEKHN1Q494U1 663 aaPredicted RBP14.53□□□□□ -0.08
SSBP3-205ENST00000417664 SLC22A6Q4U2R8 563 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 SFRP4Q6FHJ7 346 aaPredicted RBP14.53□□□□□ -0.08
SSBP3-205ENST00000417664 STEAP1BQ6NZ63 245 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 ZNF585AQ6P3V2 769 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 ASCL4Q6XD76 172 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 MDP1Q86V88 176 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 GABRG1Q8N1C3 465 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 TM2D1Q9BX74 207 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 METTL9Q9H1A3 318 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 C20orf85Q9H1P6 137 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.53□□□□□ -0.084e-7■■■■■ 27
SSBP3-205ENST00000417664 PCDHB16Q9NRJ7 776 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 LOC400499M0QZD8 3231 aa14.53□□□□□ -0.08
SSBP3-205ENST00000417664 TRAV6A0A075B6T7 132 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 TMEM235A6NFC5 223 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 FIGNL2A6NMB9 653 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 ICMTO60725 284 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 PEX14O75381 377 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 CPT2P23786 658 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 RRAS2P62070 204 aaPredicted RBP14.52□□□□□ -0.08
SSBP3-205ENST00000417664 RBMS2Q15434 407 aaKnown RBP14.52□□□□□ -0.08
SSBP3-205ENST00000417664 GABRA6Q16445 453 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 TBC1D28Q2M2D7 210 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 RTL6Q6ICC9 239 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 FAM180AQ6UWF9 173 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 SLC30A7Q8NEW0 376 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 PXT1Q8NFP0 134 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 OR4C16Q8NGL9 310 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 RAB3CQ96E17 227 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 ABHD17AQ96GS6 310 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 POM121Q96HA1 1249 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 SELENOIQ9C0D9 397 aa14.52□□□□□ -0.08
SSBP3-205ENST00000417664 NDUFB6O95139 128 aa14.52□□□□□ -0.09
SSBP3-205ENST00000417664 CST4P01036 141 aa14.52□□□□□ -0.09
SSBP3-205ENST00000417664 CD74P04233 296 aa14.52□□□□□ -0.09
SSBP3-205ENST00000417664 HIST1H1DP16402 221 aaKnown RBP14.52□□□□□ -0.09
SSBP3-205ENST00000417664 MGMTP16455 207 aa14.52□□□□□ -0.09
SSBP3-205ENST00000417664 TBPP20226 339 aa14.52□□□□□ -0.09
SSBP3-205ENST00000417664 UCNP55089 124 aa14.52□□□□□ -0.09
SSBP3-205ENST00000417664 PER3P56645 1201 aa14.52□□□□□ -0.09
SSBP3-205ENST00000417664 TMEM255AQ5JRV8 349 aa14.52□□□□□ -0.09
SSBP3-205ENST00000417664 C17orf78Q8N4C9 275 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms