RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 IGHV2-70P01814 119 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 GRPP07492 148 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 CSNK2BP67870 215 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 HOXA4Q00056 320 aaPredicted RBP10.51□□□□□ -0.73
SKA1-203ENST00000417656 MZT1Q08AG7 82 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 RIPPLY1Q0D2K3 151 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 ST3GAL4Q11206 333 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 ALKBH1Q13686 389 aaKnown RBP10.51□□□□□ -0.73
SKA1-203ENST00000417656 DMRTC1Q5HYR2 192 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 CEP78Q5JTW2 689 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 ZBTB37Q5TC79 503 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 Q71RC1 249 aaPredicted RBP10.51□□□□□ -0.73
SKA1-203ENST00000417656 RDH10Q8IZV5 341 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 SPERTQ8NA61 448 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 OR14K1Q8NGZ2 314 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 RAB1CQ92928 201 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 CNBD2Q96M20 576 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 MICU1Q9BPX6 476 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 RTL8AQ9BWD3 113 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 FN3KRPQ9HA64 309 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 PLEKHA1Q9HB21 404 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 ABCB9Q9NP78 766 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 PLCXD1Q9NUJ7 323 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 C14orf119Q9NWQ9 140 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 CLEC2DQ9UHP7 191 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 NPTNQ9Y639 398 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 ZANQ9Y493 2812 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 YLPM1P49750 1951 aaKnown RBP10.5□□□□□ -0.73
SKA1-203ENST00000417656 A6NIN4 97 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 OR4C45A6NMZ5 311 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 C3orf80F5H4A9 247 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 IFNL4K9M1U5 179 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 ZNF205O95201 554 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 HEXAP06865 529 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 IGHV4-31P0DP07 118 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 THBS2P35442 1172 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 GBX2P52951 348 aaPredicted RBP10.5□□□□□ -0.73
SKA1-203ENST00000417656 BTG1P62324 171 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 ZNF154Q13106 437 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 ZMYND11Q15326 602 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 ZNF181Q2M3W8 571 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 FAM201AQ5SY85 155 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 C6orf141Q5SZD1 244 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 PLCXD3Q63HM9 321 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 XAF1Q6GPH4 301 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 Q6ZSR3 168 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 ZNF826PQ6ZT77 177 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 PEG10Q86TG7 708 aaKnown RBP10.5□□□□□ -0.73
SKA1-203ENST00000417656 STX19Q8N4C7 294 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 KLHL36Q8N4N3 616 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 OR1M1Q8NGA1 313 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 OR11L1Q8NGX0 322 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 OR10AC1Q8NH08 325 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 Q8TCH9 128 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 OR5P3Q8WZ94 311 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 HPS1Q92902 700 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 GAL3ST1Q99999 423 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 GPR173Q9NS66 373 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 FKBP14Q9NWM8 211 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 C1orf123Q9NWV4 160 aa10.5□□□□□ -0.73
SKA1-203ENST00000417656 CAB39Q9Y376 341 aaPredicted RBP10.5□□□□□ -0.73
SKA1-203ENST00000417656 hCG_1807616A0A1W2PRN6 198 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 LRRC30A6NM36 301 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 DHRS7CA6NNS2 312 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 IRF2P14316 349 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 CD80P33681 288 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 CCR9P51686 369 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 GTF2A1P52655 376 aaPredicted RBP10.49□□□□□ -0.73
SKA1-203ENST00000417656 MRPL28Q13084 256 aaKnown RBP10.49□□□□□ -0.73
SKA1-203ENST00000417656 MED21Q13503 144 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 CLVS2Q5SYC1 327 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 TMEM244Q5VVB8 128 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 TMEM42Q69YG0 159 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 TMPRSS11AQ6ZMR5 421 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 KCTD8Q6ZWB6 473 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 MOB3CQ70IA8 216 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 KRT74Q7RTS7 529 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 ZNF676Q8N7Q3 588 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 BOLLQ8N9W6 283 aaKnown RBP10.49□□□□□ -0.73
SKA1-203ENST00000417656 C19orf18Q8NEA5 215 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 OR52N1Q8NH53 320 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 SGCDQ92629 289 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 ITFG2Q969R8 447 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 ERGIC1Q969X5 290 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 RNF170Q96K19 258 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 ZNF184Q99676 751 aaPredicted RBP10.49□□□□□ -0.73
SKA1-203ENST00000417656 PAK1IP1Q9NWT1 392 aaPredicted RBP10.49□□□□□ -0.73
SKA1-203ENST00000417656 CHCHD3Q9NX63 227 aaKnown RBP10.49□□□□□ -0.73
SKA1-203ENST00000417656 UBAP1Q9NZ09 502 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 RAB26Q9ULW5 256 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 PCDHGB5Q9Y5G0 923 aa10.49□□□□□ -0.73
SKA1-203ENST00000417656 ANKRD61A6NGH8 418 aa10.48□□□□□ -0.73
SKA1-203ENST00000417656 TMEM210A6NLX4 147 aa10.48□□□□□ -0.73
SKA1-203ENST00000417656 MYL12BO14950 172 aa10.48□□□□□ -0.73
SKA1-203ENST00000417656 CD5LO43866 347 aa10.48□□□□□ -0.73
SKA1-203ENST00000417656 ZFPL1O95159 310 aa10.48□□□□□ -0.73
SKA1-203ENST00000417656 LALBAP00709 142 aa10.48□□□□□ -0.73
SKA1-203ENST00000417656 NRASP01111 189 aa10.48□□□□□ -0.73
SKA1-203ENST00000417656 IGHV2-5P01817 119 aa10.48□□□□□ -0.73
SKA1-203ENST00000417656 ISG15P05161 165 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms