RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 BANF2Q9H503 90 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 LHX6Q9UPM6 363 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 A0A0A6YYJ9 748 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 TMEM235A6NFC5 223 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 C1QTNF9BB2RNN3 333 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 MPIG6BO95866 241 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 CRYABP02511 175 aaKnown RBP16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 CHRM2P08172 466 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 C1QTNF9P0C862 333 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 KIR2DL2P43627 348 aaPredicted RBP16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 ZP1P60852 638 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 PLP2Q04941 152 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 CNN3Q15417 329 aaKnown RBP16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 GSG1Q2KHT4 349 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 CDNFQ49AH0 187 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 Q6ZTK2 550 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 OR4C16Q8NGL9 310 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 TNFAIP8L1Q8WVP5 186 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 EXTL1Q92935 676 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 REPIN1Q9BWE0 567 aaKnown RBP16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 TMEM59Q9BXS4 323 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 GHITMQ9H3K2 345 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 TUBD1Q9UJT1 453 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 ING4Q9UNL4 249 aa16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 URB1O60287 2271 aaKnown RBP16.64■□□□□ 0.25
RAB3IP-205ENST00000417413 IGKV1-27A0A075B6S5 117 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 NRASP01111 189 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 GTF2F2P13984 249 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 CCNOP22674 350 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 PRKACBP22694 351 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 ACTBP60709 375 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 ACTG1P63261 375 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 PLEKHN1Q494U1 663 aaPredicted RBP16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 ATAD3CQ5T2N8 411 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 ZBTB37Q5TC79 503 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 CDH24Q86UP0 819 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 TMEM229BQ8NBD8 167 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 CHST4Q8NCG5 386 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 OR56B4Q8NH76 319 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 NANOS1Q8WY41 292 aaKnown RBP16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 APOBEC3DQ96AK3 386 aaPredicted RBP16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 ACTR6Q9GZN1 396 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 C20orf85Q9H1P6 137 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 A8MV72 311 aaPredicted RBP16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 CRTAPO75718 401 aaPredicted RBP16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 AKAIN1P0CW23 69 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 FAUP35544 74 aaKnown RBP16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 RPS27AP62979 156 aaKnown RBP16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 LINC00303Q3SY05 128 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 SLC22A6Q4U2R8 563 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 NSUN5P2Q63ZY6 315 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 Q6ZT83 130 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 RTN4RL2Q86UN3 420 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 MDP1Q86V88 176 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 FAM89BQ8N5H3 189 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 OR4D10Q8NGI6 311 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 SELENOIQ9C0D9 397 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 MCUBQ9NWR8 336 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 ZNF107Q9UII5 783 aaPredicted RBP16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 ZNF221Q9UK13 617 aa16.63■□□□□ 0.25
RAB3IP-205ENST00000417413 ZNF816-ZNF321PA0A0X1KG74 233 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 SOCS1O15524 211 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 CNOT4O95628 575 aaKnown RBP16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 CD3DP04234 171 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 MTCP1P56278 107 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 TMEM50BP56557 158 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 RRAS2P62070 204 aaPredicted RBP16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 GK2Q14410 553 aaPredicted RBP16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 FAM189A2Q15884 450 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 OR2A2Q6IF42 318 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 VWA1Q6PCB0 445 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 FJX1Q86VR8 437 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 GABRG1Q8N1C3 465 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 OR6K3Q8NGY3 331 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 MS4A3Q96HJ5 214 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 CST11Q9H112 138 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 FLVCR2Q9UPI3 526 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 STARD10Q9Y365 291 aa16.62■□□□□ 0.25
RAB3IP-205ENST00000417413 GTF3C1Q12789 2109 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 ZFHX4Q86UP3 3567 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 FAM230AA0A1W2PPH8 454 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 FOXI3A8MTJ6 420 aaPredicted RBP16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 NDUFB6O95139 128 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 NGFP01138 241 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 FCER2P06734 321 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 GNB3P16520 340 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 PLAC9Q5JTB6 97 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 STEAP1BQ6NZ63 245 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 ZNF585AQ6P3V2 769 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 ASCL4Q6XD76 172 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 LHFPL2Q6ZUX7 228 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 CNEP1R1Q8N9A8 125 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 DVL3Q92997 716 aaPredicted RBP16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 URM1Q9BTM9 101 aaKnown RBP16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 NEK6Q9HC98 313 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 TP53TG5Q9Y2B4 290 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 LOC400499M0QZD8 3231 aa16.61■□□□□ 0.25
RAB3IP-205ENST00000417413 SSX5O60225 188 aa16.6■□□□□ 0.25
RAB3IP-205ENST00000417413 SERPINA5P05154 406 aa16.6■□□□□ 0.25
RAB3IP-205ENST00000417413 MGMTP16455 207 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms