RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 FIP1L1Q6UN15 594 aaKnown RBP10.74□□□□□ -0.69
LINC00339-202ENST00000416769 DCXRQ7Z4W1 244 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 MOGAT3Q86VF5 341 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 EGFL6Q8IUX8 553 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 LINC00346Q8IVM7 164 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 ALDH16A1Q8IZ83 802 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 ACBD7Q8N6N7 88 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 OR52I1Q8NGK6 324 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 ASB17Q8WXJ9 295 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 MYDGFQ969H8 173 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 TMEM80Q96HE8 168 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 MEGF10Q96KG7 1140 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 MYCBPQ99417 103 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-202ENST00000416769 ABHD6Q9BV23 337 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 JAM3Q9BX67 310 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 DUSP21Q9H596 190 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 ELOVL3Q9HB03 270 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 INPP5EQ9NRR6 644 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 C1RLQ9NZP8 487 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 CGGBP1Q9UFW8 167 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-202ENST00000416769 LAMP5Q9UJQ1 280 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 BLOC1S6Q9UL45 172 aa10.74□□□□□ -0.69
LINC00339-202ENST00000416769 PTGES3LE9PB15 166 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 RER1O15258 196 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 SGCEO43556 437 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 KNG1P01042 644 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 IGHA1P01876 353 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 HLA-DPB1P04440 258 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 COX5BP10606 129 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 PSKH1P11801 424 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 TNFRSF1AP19438 455 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 ANOS1P23352 680 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 ACTC1P68032 377 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 ACTA1P68133 377 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 SLC35A2P78381 396 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 ST3GAL4Q11206 333 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 ZMAT1Q5H9K5 638 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 KCTD18Q6PI47 426 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-202ENST00000416769 CORO6Q6QEF8 472 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 STX19Q8N4C7 294 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 BHLHE23Q8NDY6 225 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 THEM6Q8WUY1 208 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 RAB40AQ8WXH6 277 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 HAVCR1Q96D42 359 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 MAP6Q96JE9 813 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 COPS4Q9BT78 406 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 TBCCD1Q9NVR7 557 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 IL19Q9UHD0 177 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 DIMT1Q9UNQ2 313 aaKnown RBP10.73□□□□□ -0.69
LINC00339-202ENST00000416769 COPS3Q9UNS2 423 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 MYRFQ9Y2G1 1151 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 BOLA1Q9Y3E2 137 aa10.73□□□□□ -0.69
LINC00339-202ENST00000416769 A0A1W2PQL4 384 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-202ENST00000416769 DAPL1A0PJW8 107 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 SRRM5B3KS81 715 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 MRPS14O60783 128 aaKnown RBP10.72□□□□□ -0.69
LINC00339-202ENST00000416769 FCN3O75636 299 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 APOL3O95236 402 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 TSPAN15O95858 294 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 CDK1P06493 297 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 TNFSF4P23510 183 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 GNB2P62879 340 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 EGR3Q06889 387 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 ECH1Q13011 328 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 RNLSQ5VYX0 342 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 DEGS2Q6QHC5 323 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 CFAP77Q6ZQR2 320 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 AHSA2Q719I0 299 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 KCTD20Q7Z5Y7 419 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 OR10H4Q8NGA5 316 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 RNF133Q8WVZ7 376 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 SLAMF6Q96DU3 332 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 MRPL48Q96GC5 212 aaKnown RBP10.72□□□□□ -0.69
LINC00339-202ENST00000416769 NR1H4Q96RI1 486 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-202ENST00000416769 COQ7Q99807 217 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 CITED1Q99966 193 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 NUDT16L1Q9BRJ7 211 aaKnown RBP10.72□□□□□ -0.69
LINC00339-202ENST00000416769 ZNF649Q9BS31 505 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 HDHD2Q9H0R4 259 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 PNRC2Q9NPJ4 139 aaKnown RBP10.72□□□□□ -0.69
LINC00339-202ENST00000416769 CTSZQ9UBR2 303 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 ATPIF1Q9UII2 106 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 EXOSC1Q9Y3B2 195 aaKnown RBP10.72□□□□□ -0.69
LINC00339-202ENST00000416769 MMP24Q9Y5R2 645 aa10.72□□□□□ -0.69
LINC00339-202ENST00000416769 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ZNF254O75437 659 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 MELTFP08582 738 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 PITPNBP48739 271 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 GABARAPL2P60520 117 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ROM1Q03395 351 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ZNF85Q03923 595 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 PRB3Q04118 309 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-202ENST00000416769 GALEQ14376 348 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ZNF404Q494X3 552 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 PRAMEF6Q5VXH4 476 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 OLFML2AQ68BL7 652 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ASPHD2Q6ICH7 369 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 BRICD5Q6PL45 260 aa10.71□□□□□ -0.69
LINC00339-202ENST00000416769 ZNF322Q6U7Q0 402 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-202ENST00000416769 BTNL3Q6UXE8 466 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms