RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 KCNE1BA0A087WTH5 132 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 SLC25A17O43808 307 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 RAMP1O60894 148 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 CSF1P09603 554 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 LIPCP11150 499 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 ARR3P36575 388 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 ACAA2P42765 397 aaKnown RBP18.13■□□□□ 0.49
AP1S3-205ENST00000415298 MC1RQ01726 317 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 SPOCK1Q08629 439 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 RUNX2Q13950 521 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 C17orf64Q86WR6 236 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 ZNF775Q96BV0 537 aaPredicted RBP18.13■□□□□ 0.49
AP1S3-205ENST00000415298 BPIFA2Q96DR5 249 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 NOP16Q9Y3C1 178 aaKnown RBP18.13■□□□□ 0.49
AP1S3-205ENST00000415298 A0A1W2PR48 441 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 SCDO00767 359 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 CDX4O14627 284 aaPredicted RBP18.13■□□□□ 0.49
AP1S3-205ENST00000415298 GPANK1O95872 356 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 PVRP15151 417 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 OR10J1P30954 320 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 UCP2P55851 309 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 ZNF311Q5JNZ3 666 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 AADACL3Q5VUY0 350 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 GUSBP11Q6P575 273 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 NFKBIDQ8NI38 313 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 ZNF48Q96MX3 618 aaPredicted RBP18.13■□□□□ 0.49
AP1S3-205ENST00000415298 CXorf36Q9H7Y0 433 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 Q9N2J8 555 aa18.13■□□□□ 0.49
AP1S3-205ENST00000415298 IGHV2-70DA0A0C4DH43 119 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 PPP5D1E7EU14 171 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 SCGB1D1O95968 90 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 AMD1P17707 334 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 BHLHA15Q7RTS1 189 aaPredicted RBP18.12■□□□□ 0.49
AP1S3-205ENST00000415298 ADCK2Q7Z695 626 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 H1FOOQ8IZA3 346 aaPredicted RBP18.12■□□□□ 0.49
AP1S3-205ENST00000415298 SELENOHQ8IZQ5 122 aaKnown RBP18.12■□□□□ 0.49
AP1S3-205ENST00000415298 SYNPO2LQ9H987 977 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 OR2S2Q9NQN1 319 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 SEMA4GQ9NTN9 838 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 CSAG2Q9Y5P2 127 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 H1F0P07305 194 aaKnown RBP18.12■□□□□ 0.49
AP1S3-205ENST00000415298 GLB1P16278 677 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 AMZ1Q400G9 498 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 SLC25A26Q70HW3 274 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 MRGPREQ86SM8 312 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 SYT9Q86SS6 491 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 ADAMTS18Q8TE60 1221 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 TMEM18Q96B42 140 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 DUSP23Q9BVJ7 150 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 CST9LQ9H4G1 147 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 SRPK3Q9UPE1 567 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 DMXL1Q9Y485 3027 aa18.12■□□□□ 0.49
AP1S3-205ENST00000415298 RIF1Q5UIP0 2472 aaKnown RBP18.12■□□□□ 0.49
AP1S3-205ENST00000415298 ANKUB1A6NFN9 424 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 SLC22A31A6NKX4 558 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 SERPINE3A8MV23 424 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 C17orf105B2RV13 164 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 CDC40O60508 579 aaKnown RBP eCLIP18.11■□□□□ 0.49
AP1S3-205ENST00000415298 ONECUT2O95948 504 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 OR2T7P0C7T2 308 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 MMP16P51512 607 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 CHD3Q12873 2000 aaKnown RBP18.11■□□□□ 0.49
AP1S3-205ENST00000415298 FDX2Q6P4F2 183 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 OR2M7Q8NG81 312 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 OR5L1Q8NGL2 311 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 SLC2A9Q9NRM0 540 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 MTFP1Q9UDX5 166 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 K7EPK0 472 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 DLL1O00548 723 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 DNAJB6O75190 326 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 NME6O75414 186 aaPredicted RBP18.11■□□□□ 0.49
AP1S3-205ENST00000415298 PDYNP01213 254 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 RAB40ALP0C0E4 278 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 COX7A2P14406 83 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 SMIM21Q3B7S5 101 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 LDLRAD2Q5SZI1 272 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 FAM71E2Q8N5Q1 922 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 RAB40AQ8WXH6 277 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 TMEM234Q8WY98 164 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 FKBP11Q9NYL4 201 aa18.11■□□□□ 0.49
AP1S3-205ENST00000415298 STATHP02808 62 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 GLRA1P23415 457 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 GFERP55789 205 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 DCAF7P61962 342 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 CSNK1G2P78368 415 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 CFHR1Q03591 330 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 DHRS2Q13268 280 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 ALG10BQ5I7T1 473 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 SOHLH1Q5JUK2 328 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 OVCH1Q7RTY7 1134 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 AK6Q9Y3D8 172 aaKnown RBP18.1■□□□□ 0.49
AP1S3-205ENST00000415298 MDC1Q14676 2089 aaKnown RBP18.1■□□□□ 0.49
AP1S3-205ENST00000415298 AKAIN1P0CW23 69 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 OR5H8P0DN80 308 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 ALPPL2P10696 532 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 UCP3P55916 312 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 RPS20P60866 119 aaKnown RBP18.1■□□□□ 0.49
AP1S3-205ENST00000415298 NIPAL3Q6P499 406 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 OOSP2Q86WS3 158 aa18.1■□□□□ 0.49
AP1S3-205ENST00000415298 CCDC74AQ96AQ1 378 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms