RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PRSS23O95084 383 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 PPP1CBP62140 327 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 MIDNQ504T8 468 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 BHLHE23Q8NDY6 225 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 OIT3Q8WWZ8 545 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 ARSGQ96EG1 525 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 DERL3Q96Q80 235 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 OR5V1Q9UGF6 321 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 SSSCA1O60232 199 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 IGHV3-9P01782 118 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 ZNF250P15622 560 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 ATF1P18846 271 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 PCMT1P22061 227 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 ZNF121P58317 390 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 SPEM1Q8N4L4 309 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 BVESQ8NE79 360 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 ST6GAL2Q96JF0 529 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 ELOVL1Q9BW60 279 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 MMP25Q9NPA2 562 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 CBR3O75828 277 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 RRASP10301 218 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 PCP4P48539 62 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 UBE2G1P62253 170 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 SLC16A12Q6ZSM3 486 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 LSRQ86X29 649 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 CISD2Q8N5K1 135 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 LILRB1Q8NHL6 650 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 ZPBPQ9BS86 351 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 SIRT3Q9NTG7 399 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 WSB2Q9NYS7 404 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 OR5H8P0DN80 308 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 RPS27P42677 84 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 PCBP3P57721 371 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 EDDM3AQ14507 147 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 ZNF626Q68DY1 528 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 ZDHHC23Q8IYP9 409 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 MARCH1Q8TCQ1 289 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 EGLN1Q9GZT9 426 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 RAG2P55895 527 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 ST3GAL2Q16842 350 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 CDONQ4KMG0 1287 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 PP6455Q8WZ26 134 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 FAM234AQ9H0X4 552 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 DNAJB12Q9NXW2 375 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 A0A1W2PNV4 684 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 ARPC3O15145 178 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 SUB1P53999 127 aaKnown RBP eCLIP12.34□□□□□ -0.437e-8■■■□□ 19.1
SMARCA4-202ENST00000413806 DSCR4P56555 118 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 SPACA9Q96E40 222 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 KTI12Q96EK9 354 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 LRP12Q9Y561 859 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 TERTO14746 1132 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 METAP1P53582 386 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 RPL7L1Q6DKI1 246 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 Q6ZN92 141 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 OR5AS1Q8N127 324 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 C5orf49A4QMS7 147 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 SDCBPO00560 298 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 CXCL13O43927 109 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 RPA2P15927 270 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 GABRG2P18507 467 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 FAM219BQ5XKK7 198 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 THNSL2Q86YJ6 484 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 PHYHIPLQ96FC7 376 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 PACRGQ96M98 296 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 SOX7Q9BT81 388 aa12.34□□□□□ -0.43
SMARCA4-202ENST00000413806 LINC00862A6NCI5 91 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 ACAA1P09110 424 aaPredicted RBP12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 GALR1P47211 349 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 FUT6P51993 359 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 PRAMEF5Q5TYX0 476 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 PRAMEF6Q5VXH4 476 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 VWA1Q6PCB0 445 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 CMTM2Q8TAZ6 248 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 FAM210BQ96KR6 192 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 KLK11Q9UBX7 282 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 CACFD1Q9UGQ2 172 aa12.33□□□□□ -0.43
SMARCA4-202ENST00000413806 TNFSF11O14788 317 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 RFC3P40938 356 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 SSX1Q16384 188 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 PRICKLE4Q2TBC4 344 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 FAM27D1Q5T7N8 215 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 C8orf82Q6P1X6 216 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 OSR2Q8N2R0 312 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 CPEB3Q8NE35 698 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 H1FXQ92522 213 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 CBLN2Q8IUK8 224 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 ETFBKMTQ8IXQ9 262 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 UBALD2Q8IYN6 164 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 ZDHHC22Q8N966 263 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 NHLRC2Q8NBF2 726 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 EID2BQ96D98 161 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 TAAR9Q96RI9 348 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 ING1Q9UK53 422 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 LOXL2Q9Y4K0 774 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms