RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GKN2Q86XP6 184 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 UBAC2Q8NBM4 344 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 AKR1E2Q96JD6 320 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 TAAR9Q96RI9 348 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 GPER1Q99527 375 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 EMC6Q9BV81 110 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 PLEKHA2Q9HB19 425 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 ZNF304Q9HCX3 659 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 FBXL17Q9UF56 701 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 SUSD2Q9UGT4 822 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 POLR1DQ9Y2S0 133 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 PCNX3Q9H6A9 2034 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 A0A1W2PP11 408 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 A0A1W2PPC4 97 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 SERPINE3A8MV23 424 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 ETV2O00321 342 aaPredicted RBP15.54■□□□□ 0.08
SDCBP-202ENST00000413219 SDCBPO00560 298 aaPredicted RBP15.54■□□□□ 0.08
SDCBP-202ENST00000413219 S100A6P06703 90 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 PRF1P14222 555 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 CPT2P23786 658 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 PTGER4P35408 488 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 UCP2P55851 309 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 ZNF121P58317 390 aaPredicted RBP15.54■□□□□ 0.08
SDCBP-202ENST00000413219 OR2A2Q6IF42 318 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 C17orf82Q86X59 251 aaPredicted RBP15.54■□□□□ 0.08
SDCBP-202ENST00000413219 PNLDC1Q8NA58 520 aaKnown RBP15.54■□□□□ 0.08
SDCBP-202ENST00000413219 ADPRHL1Q8NDY3 354 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 NOXO1Q8NFA2 376 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 OR9K2Q8NGE7 335 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 OR51T1Q8NGJ9 327 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 FNDC9Q8TBE3 224 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 NANPQ8TBE9 248 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 ARV1Q9H2C2 271 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 SEBOXQ9HB31 216 aaPredicted RBP15.54■□□□□ 0.08
SDCBP-202ENST00000413219 FAM212BQ9NTI7 297 aaPredicted RBP15.54■□□□□ 0.08
SDCBP-202ENST00000413219 B3GAT1Q9P2W7 334 aa15.54■□□□□ 0.08
SDCBP-202ENST00000413219 VSTM2BA6NLU5 285 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 LINC01387J3KSC0 135 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 AGPAT2O15120 278 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 RRP8O43159 456 aaKnown RBP15.53■□□□□ 0.08
SDCBP-202ENST00000413219 SGCEO43556 437 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 OR8U9P0C7N5 309 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 ZNF44P15621 663 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 CHRFAM7AQ494W8 412 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 OR8U1Q8NH10 309 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 PRRX2Q99811 253 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 VN1R1Q9GZP7 353 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 METTL1Q9UBP6 276 aaKnown RBP15.53■□□□□ 0.08
SDCBP-202ENST00000413219 CYP8B1Q9UNU6 501 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 THBS4P35443 961 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 CLRN1P58418 232 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 GABREP78334 506 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 KCNMB1Q16558 191 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 TCEAL3Q969E4 200 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 FAM71F1Q96KD3 344 aaPredicted RBP15.53■□□□□ 0.08
SDCBP-202ENST00000413219 SOX7Q9BT81 388 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 PECRQ9BY49 303 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 RPS10P5Q9NQ39 176 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 PPP4R1LQ9P1A2 415 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 AMDHD2Q9Y303 409 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 THADAQ6YHU6 1953 aa15.53■□□□□ 0.08
SDCBP-202ENST00000413219 TSPAN15O95858 294 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 IFNA21P01568 189 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 IGHG1P01857 330 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 FABP1P07148 127 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 CTSDP07339 412 aaPredicted RBP15.52■□□□□ 0.08
SDCBP-202ENST00000413219 PGA4P0DJD7 388 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 PGA3P0DJD8 388 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 NAT2P11245 290 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 FOSL2P15408 326 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 TMEM33P57088 247 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 RNF4P78317 190 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 FOXF1Q12946 379 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 UEVLDQ8IX04 471 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 SECTM1Q8WVN6 248 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 TM2D1Q9BX74 207 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 ZNF319Q9P2F9 582 aa15.52■□□□□ 0.08
SDCBP-202ENST00000413219 IGKV1-9A0A0C4DH69 117 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 HPNP05981 417 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 GLAP06280 429 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 ZNF806P0C7X5 589 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 NME1P15531 152 aaKnown RBP15.52■□□□□ 0.07
SDCBP-202ENST00000413219 SNCAP37840 140 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 HYAL1Q12794 435 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 SLC25A47Q6Q0C1 308 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 SGPP2Q8IWX5 399 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 CARFQ8N187 725 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 PLPP5Q8NEB5 264 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 OR14K1Q8NGZ2 314 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 LMX1AQ8TE12 382 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 SLC25A43Q8WUT9 341 aaPredicted RBP15.52■□□□□ 0.07
SDCBP-202ENST00000413219 PNRC2Q9NPJ4 139 aaKnown RBP15.52■□□□□ 0.07
SDCBP-202ENST00000413219 SLCO1B1Q9Y6L6 691 aa15.52■□□□□ 0.07
SDCBP-202ENST00000413219 KNG1P01042 644 aa15.51■□□□□ 0.07
SDCBP-202ENST00000413219 SEC11BP0C7V7 166 aa15.51■□□□□ 0.07
SDCBP-202ENST00000413219 BLVRBP30043 206 aaPredicted RBP15.51■□□□□ 0.07
SDCBP-202ENST00000413219 GLP1RP43220 463 aa15.51■□□□□ 0.07
SDCBP-202ENST00000413219 PPT1P50897 306 aa15.51■□□□□ 0.07
SDCBP-202ENST00000413219 SUCLG1P53597 346 aaKnown RBP15.51■□□□□ 0.07
SDCBP-202ENST00000413219 GRB2P62993 217 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms