RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 MDP1Q86V88 176 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 RPRMLQ8N4K4 120 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 CISD2Q8N5K1 135 aaKnown RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 OR52N4Q8NGI2 321 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 OR13C9Q8NGT0 318 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 OR2AE1Q8NHA4 323 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 AKAP1Q92667 903 aaKnown RBP eCLIP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 FAM3DQ96BQ1 224 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 SNRNP40Q96DI7 357 aaKnown RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 TMEM68Q96MH6 324 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 SFXN3Q9BWM7 321 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PRORYQ9H606 182 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 C14orf119Q9NWQ9 140 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PROCRQ9UNN8 238 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PTPRQQ9UMZ3 2332 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 TMEM272A0A1B0GTI8 110 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 TMEM8BA6NDV4 472 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 GSTZ1O43708 216 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 GLI4P10075 376 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 HOXC12P31275 282 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ALDH3B1P43353 468 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 POU3F4P49335 361 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 MMP15P51511 669 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ART1P52961 327 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF92Q03936 586 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PLA2G7Q13093 441 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ASAH1Q13510 395 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 COTL1Q14019 142 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 GFOD2Q3B7J2 385 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 C2orf76Q3KRA6 126 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PYDC2Q56P42 97 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 DNM1P46Q6ZS02 220 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ASCC1Q8N9N2 400 aaKnown RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 WDR31Q8NA23 367 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 SEMA6DQ8NFY4 1073 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 OR51D1Q8NGF3 324 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 OR4D6Q8NGJ1 314 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 SYNPRQ8TBG9 265 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 UBASH3BQ8TF42 649 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ZCCHC14Q8WYQ9 949 aaKnown RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 APOBEC3DQ96AK3 386 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 CNTD2Q9H8S5 307 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PLEKHA1Q9HB21 404 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 OBP2BQ9NPH6 170 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ZC4H2Q9NQZ6 224 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 CGGBP1Q9UFW8 167 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PIGLQ9Y2B2 252 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 A0A1W2PQ09 198 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 CIB4A0PJX0 185 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 C5orf49A4QMS7 147 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 A6NIN4 97 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 ATP6V1G2-DDX39BF2Z307 99 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 TOR1AO14656 332 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 RAD51DO75771 328 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 LYZL6O75951 148 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 IL2RAP01589 272 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 IGKV3-15P01624 115 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 FAHP16930 419 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 RAB6AP20340 208 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 MAP2K3P46734 347 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 HOXA1P49639 335 aaPredicted RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 GSK3AP49840 483 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 PITPNAQ00169 270 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 PLP2Q04941 152 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 UBE2V2Q15819 145 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 FAM209BQ5JX69 171 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 HACD4Q5VWC8 232 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 BIVMQ86UB2 503 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 DOLPP1Q86YN1 238 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 Q8N402 240 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 FAM169BQ8N8A8 192 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 ZNF610Q8N9Z0 462 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 C1orf147Q96MC9 270 aaPredicted RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 ABHD1Q96SE0 405 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 REPIN1Q9BWE0 567 aaKnown RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 OPN3Q9H1Y3 402 aaPredicted RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 OPA3Q9H6K4 179 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 ACACAQ13085 2346 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 CTAG2O75638 210 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 CBR1P16152 277 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 APLNRP35414 380 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 ZNF93P35789 620 aaPredicted RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 WNT5AP41221 380 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 PTH2RP49190 550 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 PER3P56645 1201 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 IFITM2Q01629 132 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 SCN1BQ07699 218 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 PRR30Q53SZ7 412 aaPredicted RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 CXorf67Q86X51 503 aaPredicted RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 PAQR4Q8N4S7 273 aaPredicted RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 JAGN1Q8N5M9 183 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 DACT3Q96B18 629 aaPredicted RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 FAM122AQ96E09 287 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 S100A16Q96FQ6 103 aaKnown RBP4.77□□□□□ -1.65
EPHA4-202ENST00000409854 ASF1BQ9NVP2 202 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 LAMA5O15230 3695 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 SHANK1Q9Y566 2161 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 ATMQ13315 3056 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 A0A0A6YYH2 397 aa4.77□□□□□ -1.65
EPHA4-202ENST00000409854 A6NJ64 397 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms