RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TOX4O94842 621 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 CST4P01036 141 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 LIPFP07098 398 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 MUC1P15941 1255 aaPredicted RBP15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 EPHA2P29317 976 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 GMFBP60983 142 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 IL5RAQ01344 420 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 GPR157Q5UAW9 335 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 OR5K1Q8NHB7 308 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 HPSE2Q8WWQ2 592 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 ST8SIA4Q92187 359 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 SLC25A28Q96A46 364 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 WDFY2Q96P53 400 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 PKP2Q99959 881 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 ZMAT3Q9HA38 289 aaKnown RBP15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 FAM206AQ9NX38 181 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 COPS3Q9UNS2 423 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 MGAM2Q2M2H8 2515 aa15.96■□□□□ 0.15
SMARCB1-204ENST00000407422 SRRM5B3KS81 715 aa15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 CLDN34H7C241 214 aa15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 AMY2BP19961 511 aa15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 ATP6AP1Q15904 470 aa15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 SNCBQ16143 134 aa15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 FAM216BQ8N7L0 139 aa15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 PNLDC1Q8NA58 520 aaKnown RBP15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 OR5T2Q8NGG2 359 aa15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 RTL8AQ9BWD3 113 aa15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 WDR13Q9H1Z4 485 aa15.95■□□□□ 0.14
SMARCB1-204ENST00000407422 CENPVL3A0A0U1RRI6 287 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 TMEM269A0A1B0GVZ9 245 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 HOXA3O43365 443 aaPredicted RBP15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 ARF6P62330 175 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 FOXL1Q12952 345 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 KCTD18Q6PI47 426 aaPredicted RBP15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 SCCPDHQ8NBX0 429 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 PPP1R14AQ96A00 147 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 RNF170Q96K19 258 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 MROQ9BYG7 248 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 SIRPDQ9H106 197 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 KRT84Q9NSB2 600 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 PCDHGB1Q9Y5G3 927 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 P2RY10O00398 339 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 ESRRGP62508 458 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 FAM76BQ5HYJ3 339 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 DMRTC1Q5HYR2 192 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 LCN1P1Q5VSP4 162 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 METTL11BQ5VVY1 283 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 KCTD8Q6ZWB6 473 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 PRDM13Q9H4Q3 707 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 SNTG1Q9NSN8 517 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 RPUSD1Q9UJJ7 312 aaKnown RBP15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 ZNF391Q9UJN7 358 aa15.94■□□□□ 0.14
SMARCB1-204ENST00000407422 G3V2T6 193 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 TFF1P04155 84 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 GPM6AP51674 278 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 EFNB1P98172 346 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 ROM1Q03395 351 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 IKZF1Q13422 519 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 STUMQ69YW2 141 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 DEGS2Q6QHC5 323 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 AMIGO2Q86SJ2 522 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 ZDHHC23Q8IYP9 409 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 ZNF679Q8IYX0 411 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 TCEANCQ8N8B7 351 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 FAM81AQ8TBF8 368 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 ZDHHC16Q969W1 377 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 OR8B4Q96RC9 309 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 PBOV1Q9GZY1 135 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 HAO2Q9NYQ3 351 aa15.93■□□□□ 0.14
SMARCB1-204ENST00000407422 A0A0U1RQV5 110 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 TMEM210A6NLX4 147 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 MAGEB4O15481 346 aaPredicted RBP15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 AKR7A2O43488 359 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 ECDO95905 644 aaPredicted RBP15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 SELLP14151 372 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 DCTDP32321 178 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 BPIFB3P59826 476 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 MFGE8Q08431 387 aaPredicted RBP15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 CEP78Q5JTW2 689 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 SLX4IPQ5VYV7 408 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 KDM4DQ6B0I6 523 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 MEPCEQ7L2J0 689 aaKnown RBP15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 SLC36A1Q7Z2H8 476 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 OR51E1Q8TCB6 317 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 C12orf43Q96C57 262 aaKnown RBP15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 CNN2Q99439 309 aaKnown RBP15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 ABCB9Q9NP78 766 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 TNFRSF19Q9NS68 423 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 AP4S1Q9Y587 144 aa15.92■□□□□ 0.14
SMARCB1-204ENST00000407422 ZNF816-ZNF321PA0A0X1KG74 233 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 ACOD1A6NK06 481 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 ZAR1LA6NP61 321 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 MAP2K3P46734 347 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 AADACL4Q5VUY2 407 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 C16orf87Q6PH81 154 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 COMMD2Q86X83 199 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 PDZD9Q8IXQ8 264 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 OR10Z1Q8NGY1 313 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 ASB17Q8WXJ9 295 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 LHX4Q969G2 390 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms