RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 POMPQ9Y244 141 aa10.06□□□□□ -0.8
APOBEC3B-204ENST00000407298 TCRBV3S1A0A5B6 114 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 H3BUX3 64 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 M0R1W7 72 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 DNAJC8O75937 253 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 ZNF823P16415 610 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 ANOS1P23352 680 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 BNIP1Q12981 228 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 AANATQ16613 207 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 PCK2Q16822 640 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 WDR38Q5JTN6 314 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 CD300LDQ6UXZ3 194 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 LIAT1Q6ZQX7 453 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 DPY19L4Q7Z388 723 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 LNX2Q8N448 690 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 KLHDC1Q8N7A1 406 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 SLC37A3Q8NCC5 494 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR4F17Q8NGA8 305 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR52L1Q8NGH7 329 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR51G2Q8NGK0 314 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR9Q1Q8NGQ5 310 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 C8orf46Q8TAG6 207 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 LRRC29Q8WV35 223 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 MED30Q96HR3 178 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR4F4Q96R69 305 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 DCTN5Q9BTE1 182 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 NMNAT2Q9BZQ4 307 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 NPFFR1Q9GZQ6 430 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 DNTTIP1Q9H147 329 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 TBC1D23Q9NUY8 699 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 FOXJ3Q9UPW0 622 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 SF3B6Q9Y3B4 125 aaKnown RBP10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 MAB21L2Q9Y586 359 aa10.05□□□□□ -0.8
APOBEC3B-204ENST00000407298 A0A1W2PRD5 423 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 A0A1W2PRF3 423 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 A0A1W2PRM7 423 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 ARRDC5A6NEK1 342 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 FCN3O75636 299 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 CST1P01037 141 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 NOS3P29474 1203 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 PYCR1P32322 319 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 RPS27P42677 84 aaKnown RBP10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 IKZF1Q13422 519 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 CRMP1Q14194 572 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 FLOT2Q14254 428 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 GK3PQ14409 553 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 SNAI3Q3KNW1 292 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 OXLD1Q5BKU9 147 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 ATPAF1Q5TC12 328 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 HS3ST5Q8IZT8 346 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 Q8N7P7 452 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 C11orf44Q8N8P7 122 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 PAPD5Q8NDF8 572 aaKnown RBP10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 H1FXQ92522 213 aaKnown RBP10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 MAP6Q96JE9 813 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 FEVQ99581 238 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 SSX3Q99909 188 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 TSSK6Q9BXA6 273 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 DNAJB11Q9UBS4 358 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 SIGLEC9Q9Y336 463 aa10.04□□□□□ -0.8
APOBEC3B-204ENST00000407298 NKX6-3A6NJ46 265 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 GSC2O15499 205 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 XRCC2O43543 280 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 FKBP6O75344 327 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 VSIG10L2P0DP72 767 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 CLUP10909 449 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 PAICSP22234 425 aaKnown RBP10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 POU1F1P28069 291 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 TGM4P49221 684 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 COL7A1Q02388 2944 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 TAF13Q15543 124 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 SNCBQ16143 134 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 LRRC75BQ2VPJ9 315 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 NSUN5P1Q3KNT7 163 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 GLYATL3Q5SZD4 288 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 SPATA24Q86W54 205 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 IQCF1Q8N6M8 205 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR1M1Q8NGA1 313 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR56B2PQ8NGI1 322 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR51L1Q8NGJ5 315 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR5D13Q8NGL4 314 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 OR2AE1Q8NHA4 323 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 PPP1R35Q8TAP8 253 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 GIPC3Q8TF64 312 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 TNFRSF14Q92956 283 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 MEGF9Q9H1U4 602 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 SP140LQ9H930 580 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 AURKAIP1Q9NWT8 199 aaPredicted RBP10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 COMMD3-BMI1R4GMX3 469 aa10.03□□□□□ -0.8
APOBEC3B-204ENST00000407298 KMT2CQ8NEZ4 4911 aaKnown RBP10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 A0A1W2PQ09 198 aa10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 TVP23AA6NH52 213 aa10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 FBXO24O75426 580 aa10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 GYPBP06028 91 aa10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 FAHP16930 419 aa10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 SPI1P17947 270 aa10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 CFL1P23528 166 aaKnown RBP10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 OTX1P32242 354 aaPredicted RBP10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 CBX1P83916 185 aa10.02□□□□□ -0.81
APOBEC3B-204ENST00000407298 KLRD1Q13241 179 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms