RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 WDFY2Q96P53 400 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 MICU1Q9BPX6 476 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 YIPF3Q9GZM5 350 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 PRDM13Q9H4Q3 707 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 ABCB9Q9NP78 766 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 RPUSD1Q9UJJ7 312 aaKnown RBP12.71□□□□□ -0.37
TPM1-207ENST00000403994 MPC1Q9Y5U8 109 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 CMYA5Q8N3K9 4069 aa12.71□□□□□ -0.38
TPM1-207ENST00000403994 TMEM210A6NLX4 147 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 ZNF850A8MQ14 1090 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 PRR32B1ATL7 298 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 CST4P01036 141 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 HCCSP53701 268 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 CRISP1P54107 249 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 BPIFB3P59826 476 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 C11orf91Q3C1V1 193 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 LCN1P1Q5VSP4 162 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 STUMQ69YW2 141 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 KRT77Q7Z794 578 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 OR5P3Q8WZ94 311 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 C12orf43Q96C57 262 aaKnown RBP12.7□□□□□ -0.38
TPM1-207ENST00000403994 CCL13Q99616 98 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 ZNF747Q9BV97 191 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 CADM1Q9BY67 442 aaKnown RBP12.7□□□□□ -0.38
TPM1-207ENST00000403994 TTTY10Q9BZA0 68 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 FAM206AQ9NX38 181 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 TVP23BQ9NYZ1 205 aa12.7□□□□□ -0.38
TPM1-207ENST00000403994 CENPVL3A0A0U1RRI6 287 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 M0R129 80 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 SPRY1O43609 319 aaPredicted RBP12.69□□□□□ -0.38
TPM1-207ENST00000403994 PRKYO43930 277 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 ECDO95905 644 aaPredicted RBP12.69□□□□□ -0.38
TPM1-207ENST00000403994 SELLP14151 372 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 DAPP51397 102 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 GMFBP60983 142 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 IL13RA1P78552 427 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 SLC36A1Q7Z2H8 476 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 ZDHHC23Q8IYP9 409 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 FAM81AQ8TBF8 368 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 GATAD2BQ8WXI9 593 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 RPL3LQ92901 407 aaKnown RBP12.69□□□□□ -0.38
TPM1-207ENST00000403994 RAB3IPQ96QF0 476 aaPredicted RBP12.69□□□□□ -0.38
TPM1-207ENST00000403994 WDR13Q9H1Z4 485 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 UNKLQ9H9P5 680 aaKnown RBP12.69□□□□□ -0.38
TPM1-207ENST00000403994 COPS3Q9UNS2 423 aa12.69□□□□□ -0.38
TPM1-207ENST00000403994 IGHV1-69DA0A0B4J2H0 117 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 A0A0U1RQV5 110 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 PSMD9O00233 223 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 IGHV1-69P01742 117 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 DCTDP32321 178 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 ARF6P62330 175 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 ROM1Q03395 351 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 IKZF1Q13422 519 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 PDCD1Q15116 288 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 PTGES3Q15185 160 aaKnown RBP12.68□□□□□ -0.38
TPM1-207ENST00000403994 ATP6AP1Q15904 470 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 KCTD18Q6PI47 426 aaPredicted RBP12.68□□□□□ -0.38
TPM1-207ENST00000403994 DEGS2Q6QHC5 323 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 SHISA2Q6UWI4 295 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 KCTD8Q6ZWB6 473 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 SCCPDHQ8NBX0 429 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 OR10Z1Q8NGY1 313 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 OR5K1Q8NHB7 308 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 PIGCQ92535 297 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 LHX4Q969G2 390 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 ZDHHC16Q969W1 377 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 CNN2Q99439 309 aaKnown RBP12.68□□□□□ -0.38
TPM1-207ENST00000403994 TEAD3Q99594 435 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 PRRG3Q9BZD7 231 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 NOX4Q9NPH5 578 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 KRT84Q9NSB2 600 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 HAO2Q9NYQ3 351 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 DNAJB11Q9UBS4 358 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 KPTNQ9Y664 436 aa12.68□□□□□ -0.38
TPM1-207ENST00000403994 TMEM269A0A1B0GVZ9 245 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 NKX6-3A6NJ46 265 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 ACOD1A6NK06 481 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 GSC2O15499 205 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 AKR7A2O43488 359 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 MITFO75030 526 aaPredicted RBP12.67□□□□□ -0.38
TPM1-207ENST00000403994 MELTFP08582 738 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 AMY2BP19961 511 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 EPHA2P29317 976 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 GPM6AP51674 278 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 ESRRGP62508 458 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 MFGE8Q08431 387 aaPredicted RBP12.67□□□□□ -0.38
TPM1-207ENST00000403994 BNIP1Q12981 228 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 ZNF829Q3KNS6 432 aaPredicted RBP12.67□□□□□ -0.38
TPM1-207ENST00000403994 CDONQ4KMG0 1287 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 FAM76BQ5HYJ3 339 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 C16orf87Q6PH81 154 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 Q6YL49 198 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 KRT74Q7RTS7 529 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 VMO1Q7Z5L0 202 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 BCDIN3DQ7Z5W3 292 aaKnown RBP12.67□□□□□ -0.38
TPM1-207ENST00000403994 COMMD2Q86X83 199 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 LY6G5BQ8NDX9 201 aa12.67□□□□□ -0.38
TPM1-207ENST00000403994 OR5T2Q8NGG2 359 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms