RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 HMGN3Q15651 99 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 DEGS2Q6QHC5 323 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 OR10S1Q8NGN2 331 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 ERGIC1Q969X5 290 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 BSCL2Q96G97 398 aaPredicted RBP12.36□□□□□ -0.43
APOB-202ENST00000399256 GPER1Q99527 375 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 NUDT16L1Q9BRJ7 211 aaKnown RBP12.36□□□□□ -0.43
APOB-202ENST00000399256 TDRD6O60522 2096 aaKnown RBP12.35□□□□□ -0.43
APOB-202ENST00000399256 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 ALG1L2C9J202 215 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 JTBO76095 146 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 LTBRP36941 435 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 SNCAP37840 140 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 TNFRSF4P43489 277 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 PCK2Q16822 640 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 HLA-DQA1Q5Y7H0 255 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 ABHD12BQ7Z5M8 362 aaPredicted RBP12.35□□□□□ -0.43
APOB-202ENST00000399256 OR5AS1Q8N127 324 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 OR5D18Q8NGL1 313 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 CD300LFQ8TDQ1 290 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 ZNF721Q8TF20 911 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 SLC25A43Q8WUT9 341 aaPredicted RBP12.35□□□□□ -0.43
APOB-202ENST00000399256 FAM71F1Q96KD3 344 aaPredicted RBP12.35□□□□□ -0.43
APOB-202ENST00000399256 SOHLH2Q9NX45 425 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 FBLN5Q9UBX5 448 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 B3GALT5Q9Y2C3 310 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 AKT2P31751 481 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 HAAOP46952 286 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 CSNK1EP49674 416 aaKnown RBP12.35□□□□□ -0.43
APOB-202ENST00000399256 C9orf40Q8IXQ3 194 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 PRSS58Q8IYP2 241 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 KCNG3Q8TAE7 436 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 OIT3Q8WWZ8 545 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 MRGPRX1Q96LB2 322 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 TAAR9Q96RI9 348 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 LANCL2Q9NS86 450 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 STARD10Q9Y365 291 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 UMAD1C9J7I0 102 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 AP4M1O00189 453 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 DDAH2O95865 285 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 RBMXP38159 391 aaKnown RBP12.35□□□□□ -0.43
APOB-202ENST00000399256 SULT1A1P50225 295 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 TDGQ13569 410 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 ZNF529Q6P280 563 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 GRINAQ7Z429 371 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 TMEM131Q92545 1883 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 KCNK17Q96T54 332 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 NUDT22Q9BRQ3 303 aa12.35□□□□□ -0.43
APOB-202ENST00000399256 EYSQ5T1H1 3165 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 A6NIZ1 184 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 TMEM150CB9EJG8 249 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 C1QL1O75973 258 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 CTSEP14091 401 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 THBS4P35443 961 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 RAP1BP61224 184 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 RAP1AP62834 184 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 LYPD6BQ8NI32 183 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 PRRX2Q99811 253 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 PAPOLGQ9BWT3 736 aaKnown RBP12.34□□□□□ -0.43
APOB-202ENST00000399256 CHRDQ9H2X0 955 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 FTCDNL1E5RQL4 147 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 TSPAN2O60636 221 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 DEDDO75618 318 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 IFNA2P01563 188 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 IGKV3-11P04433 115 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 NME1P15531 152 aaKnown RBP12.34□□□□□ -0.43
APOB-202ENST00000399256 RGS19P49795 217 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 C9orf152Q5JTZ5 239 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 OPN5Q6U736 354 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 OR56B1Q8NGI3 324 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 OR51T1Q8NGJ9 327 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 FNDC9Q8TBE3 224 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 NPRL2Q8WTW4 380 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 C14orf166Q9Y224 244 aaKnown RBP12.34□□□□□ -0.43
APOB-202ENST00000399256 FBXO7Q9Y3I1 522 aa12.34□□□□□ -0.43
APOB-202ENST00000399256 PHF3Q92576 2039 aaKnown RBP12.34□□□□□ -0.43
APOB-202ENST00000399256 BRWD1Q9NSI6 2320 aa12.33□□□□□ -0.43
APOB-202ENST00000399256 FIGNL2A6NMB9 653 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 OR13C7P0DN81 318 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 GALNSP34059 522 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 CAMLGP49069 296 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 YPEL5P62699 121 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 ACY1Q03154 408 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 COL19A1Q14993 1142 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 ZNF565Q8N9K5 539 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 WDSUB1Q8N9V3 476 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 AKR7LQ8NHP1 331 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 MRPL24Q96A35 216 aaKnown RBP12.33□□□□□ -0.44
APOB-202ENST00000399256 C5orf34Q96MH7 638 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 TUBA4BQ9H853 241 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 FAM212BQ9NTI7 297 aaPredicted RBP12.33□□□□□ -0.44
APOB-202ENST00000399256 C1orf123Q9NWV4 160 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 POLR1DQ9Y2S0 133 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 PPIHO43447 177 aaKnown RBP12.33□□□□□ -0.44
APOB-202ENST00000399256 GAPDHP04406 335 aaKnown RBP12.33□□□□□ -0.44
APOB-202ENST00000399256 FBP1P09467 338 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 PRF1P14222 555 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 DAP3P51398 398 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms