RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 PMP2P02689 132 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 ERCC1P07992 297 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 OR8U9P0C7N5 309 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 ZNF823P16415 610 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 GNALP38405 381 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 CEACAM6P40199 344 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 RPS10P46783 165 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 ARRB1P49407 418 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 HSD11B2P80365 405 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 PLCXD2Q0VAA5 305 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 PRSS54Q6PEW0 395 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 Q6ZS52 159 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 OR8U1Q8NH10 309 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 LYPD6BQ8NI32 183 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 ZNF721Q8TF20 911 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 ZNF775Q96BV0 537 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 LRRC61Q9BV99 259 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 SLC5A7Q9GZV3 580 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 PRO1933Q9H354 126 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 STARD10Q9Y365 291 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 FLVCR1Q9Y5Y0 555 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 A0A0A6YYH2 397 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 A6NJ64 397 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 TAAR5O14804 337 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 DXOO77932 396 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 DDAH2O95865 285 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 GNB3P16520 340 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 MPZP25189 248 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 GALNSP34059 522 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 CAPZBP47756 277 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 GABRA4P48169 554 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 C1orf100Q5SVJ3 147 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 HLA-DQA1Q5Y7H0 255 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 Q6ZRG5 221 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 COMMD1Q8N668 190 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 YPEL4Q96NS1 127 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 ZDHHC8Q9ULC8 765 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 MKRN2OSH3BPM6 223 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 IGKV3-11P04433 115 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 POLR2HP52434 150 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 NUTF2P61970 127 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 UNC119Q13432 240 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 WDFY1Q8IWB7 410 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 C9orf40Q8IXQ3 194 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 OR52N4Q8NGI2 321 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 OR6X1Q8NH79 312 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 GPR119Q8TDV5 335 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 RAB33BQ9H082 229 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 RHBDD3Q9Y3P4 386 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 TMEM131Q92545 1883 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 RPL36A-HNRNPH2H7BZ11 118 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 ADAM10O14672 748 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 OR2C1O95371 312 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 AHSA1O95433 338 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 CD37P11049 281 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 CRABP1P29762 137 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 RAP1AP62834 184 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 EBPQ15125 230 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 ANKRD39Q53RE8 183 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 TMPPEQ6ZT21 453 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 OIT3Q8WWZ8 545 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 PTGES2Q9H7Z7 377 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 BCO1Q9HAY6 547 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 RAB22AQ9UL26 194 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 WASF3Q9UPY6 502 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 TMED3Q9Y3Q3 217 aa14.16□□□□□ -0.14
CHMP1A-201ENST00000397901 ELOA3CA0A087WX78 387 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 IGKV1D-43A0A0B4J1Z2 117 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 A8MVM7 634 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 EFSO43281 561 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 NUDT21O43809 227 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 NPIPB7O75200 414 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 EFNA3P52797 238 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 USF2Q15853 346 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 PHF19Q5T6S3 580 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 COL13A1Q5TAT6 717 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 OR2A2Q6IF42 318 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 SLC26A10Q8NG04 563 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 CA5BP1Q8WTZ4 195 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 GALNT14Q96FL9 552 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 DNAJB11Q9UBS4 358 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 HDGFL3Q9Y3E1 203 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 ALG1L2C9J202 215 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 UMAD1C9J7I0 102 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 H0YIG0 161 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 TSPAN15O95858 294 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 RAB4AP20338 218 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 ID4P47928 161 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 C21orf62-AS1Q17RA5 79 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 RPL7L1Q6DKI1 246 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 GKN2Q86XP6 184 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 LYPD6Q86Y78 171 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 NKAIN3Q8N8D7 197 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 ZNF610Q8N9Z0 462 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 ST7LQ8TDW4 575 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 FOXQ1Q9C009 403 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 KCNIP3Q9Y2W7 256 aa14.15□□□□□ -0.14
CHMP1A-201ENST00000397901 TSPAN2O60636 221 aa14.14□□□□□ -0.15
CHMP1A-201ENST00000397901 CSTBP04080 98 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms