RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 GHITMQ9H3K2 345 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 KIR3DX1Q9H7L2 352 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 YTHDF2Q9Y5A9 579 aaKnown RBP13.51□□□□□ -0.25
CHL1-202ENST00000397491 MAP1LC3B2A6NCE7 125 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 ZNF732B4DXR9 585 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 HSD17B7P56937 341 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 B4GALNT1Q00973 533 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 THEM4Q5T1C6 240 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 ZNF468Q5VIY5 522 aaPredicted RBP13.51□□□□□ -0.25
CHL1-202ENST00000397491 FAM78BQ5VT40 261 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 DRAM2Q6UX65 266 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 MAP1LC3BQ9GZQ8 125 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 PRDM7Q9NQW5 492 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 MMACHCQ9Y4U1 282 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 K7EQM0 130 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 PPM1DO15297 605 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 EIF1P41567 113 aaKnown RBP13.51□□□□□ -0.25
CHL1-202ENST00000397491 YBX1P67809 324 aaKnown RBP13.51□□□□□ -0.25
CHL1-202ENST00000397491 TMEM52BQ4KMG9 183 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 LHFPL2Q6ZUX7 228 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 ERGIC1Q969X5 290 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 VN1R1Q9GZP7 353 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 ST3GAL6Q9Y274 331 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
CHL1-202ENST00000397491 CACNA1SQ13698 1873 aa13.51□□□□□ -0.25
CHL1-202ENST00000397491 KCNE1BA0A087WTH5 132 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 PCP4P48539 62 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 ARG2P78540 354 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 PNRC1Q12796 327 aaPredicted RBP13.5□□□□□ -0.25
CHL1-202ENST00000397491 EDDM3AQ14507 147 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 UBE2V2Q15819 145 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 MAML2Q8IZL2 1156 aaPredicted RBP13.5□□□□□ -0.25
CHL1-202ENST00000397491 C4orf45Q96LM5 186 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 GOLT1BQ9Y3E0 138 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 TMED3Q9Y3Q3 217 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 NRASP01111 189 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 IGLV3-27P01718 113 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 HIST1H1DP16402 221 aaKnown RBP13.5□□□□□ -0.25
CHL1-202ENST00000397491 TM4SF4P48230 202 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 BTG2P78543 158 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 TMEM267Q0VDI3 215 aaPredicted RBP13.5□□□□□ -0.25
CHL1-202ENST00000397491 ZNF154Q13106 437 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 RNF165Q6ZSG1 346 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 C10orf111Q8N326 155 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 OR10A7Q8NGE5 316 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 PBX4Q9BYU1 374 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 KCNK15Q9H427 330 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 PRR13Q9NZ81 148 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 TMEM11P17152 192 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 ENPP1P22413 925 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 RNASEKQ6P5S7 137 aaKnown RBP13.5□□□□□ -0.25
CHL1-202ENST00000397491 OR2C3Q8N628 320 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 ZG16BQ96DA0 208 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 ADGRG7Q96K78 797 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 NMES1Q9C002 83 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 LAT2Q9GZY6 243 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 Q9N2K0 584 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 FBXO34Q9NWN3 711 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 MARCH5Q9NX47 278 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 SH3BGRL2Q9UJC5 107 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 SLC17A4Q9Y2C5 497 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 CRYBG1Q9Y4K1 1723 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 TOPAZ1Q8N9V7 1692 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 SERTM2A0A1B0GWG4 89 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 ZNF737O75373 536 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 EDDM3BP56851 147 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 ZNF121P58317 390 aaPredicted RBP13.5□□□□□ -0.25
CHL1-202ENST00000397491 DGAT2L6Q6ZPD8 337 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 MS4A3Q96HJ5 214 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 CIB3Q96Q77 187 aaPredicted RBP13.5□□□□□ -0.25
CHL1-202ENST00000397491 HDAC8Q9BY41 377 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 TMPRSS13Q9BYE2 586 aa13.5□□□□□ -0.25
CHL1-202ENST00000397491 EN2P19622 333 aaPredicted RBP13.49□□□□□ -0.25
CHL1-202ENST00000397491 WBP2Q969T9 261 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 MARVELD3Q96A59 401 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 MBNL1Q9NR56 388 aaKnown RBP13.49□□□□□ -0.25
CHL1-202ENST00000397491 PLCH1Q4KWH8 1693 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 A0A0A6YYD5 115 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 CDC42EP2O14613 210 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 EIF3GO75821 320 aaKnown RBP eCLIP13.49□□□□□ -0.25
CHL1-202ENST00000397491 AMTP48728 403 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 FGF8P55075 233 aaPredicted RBP13.49□□□□□ -0.25
CHL1-202ENST00000397491 ABLIM2Q6H8Q1 611 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 THSD4Q6ZMP0 1018 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 OR2T10Q8NGZ9 312 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 C16orf52Q8NHV5 167 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 PITPNC1Q9UKF7 332 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 ARPC3O15145 178 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 FAHD2BQ6P2I3 314 aaPredicted RBP13.49□□□□□ -0.25
CHL1-202ENST00000397491 ADIPOR1Q96A54 375 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 PIK3IP1Q96FE7 263 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 FAHD2AQ96GK7 314 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 DUXBA0A1W2PPF3 345 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 ABCD4O14678 606 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 ENSAO43768 121 aaKnown RBP13.49□□□□□ -0.25
CHL1-202ENST00000397491 BSXQ3C1V8 233 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 DPPA3Q6W0C5 159 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 NRIP2Q9BQI9 281 aa13.49□□□□□ -0.25
CHL1-202ENST00000397491 NUP98P52948 1817 aa13.48□□□□□ -0.25
CHL1-202ENST00000397491 A0A0B4J2E0 115 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms