RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PTTG3PQ9NZH4 202 aa11.59□□□□□ -0.55
SEC13-205ENST00000397101 FRRS1LQ9P0K9 344 aa11.59□□□□□ -0.55
SEC13-205ENST00000397101 SIRT4Q9Y6E7 314 aaPredicted RBP11.59□□□□□ -0.55
SEC13-205ENST00000397101 A0A1B0GVI7 797 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 TMEM212A6NML5 194 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 J3QLI3 93 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 P2RY10O00398 339 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 TFAP2AP05549 437 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 HKR1P10072 659 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 CD36P16671 472 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 CPEP16870 476 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 NR4A1P22736 598 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 OTX1P32242 354 aaPredicted RBP11.58□□□□□ -0.56
SEC13-205ENST00000397101 KIR3DL2P43630 455 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 CCR9P51686 369 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 GP2P55259 537 aaKnown RBP11.58□□□□□ -0.56
SEC13-205ENST00000397101 SNTB2Q13425 540 aaKnown RBP11.58□□□□□ -0.56
SEC13-205ENST00000397101 SNAI3Q3KNW1 292 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 TMEM244Q5VVB8 128 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 FAHD2BQ6P2I3 314 aaPredicted RBP11.58□□□□□ -0.56
SEC13-205ENST00000397101 FDX2Q6P4F2 183 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 ELMOD2Q8IZ81 293 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 PRSS35Q8N3Z0 413 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 PAQR4Q8N4S7 273 aaPredicted RBP11.58□□□□□ -0.56
SEC13-205ENST00000397101 ZDHHC22Q8N966 263 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 OR8B12Q8NGG6 310 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 OR1J1Q8NGS3 322 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 TSEN15Q8WW01 171 aaKnown RBP11.58□□□□□ -0.56
SEC13-205ENST00000397101 GHSRQ92847 366 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 TMEM203Q969S6 136 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 TMIGD2Q96BF3 282 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 SMIM19Q96E16 107 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 FAHD2AQ96GK7 314 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 PDCD1LG2Q9BQ51 273 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 TPK1Q9H3S4 243 aa11.58□□□□□ -0.56
SEC13-205ENST00000397101 NUFIP1Q9UHK0 495 aaKnown RBP11.58□□□□□ -0.56
SEC13-205ENST00000397101 XRCC2O43543 280 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 SYT7O43581 403 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 PLPP2O43688 288 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 SRSF10O75494 262 aaKnown RBP11.57□□□□□ -0.56
SEC13-205ENST00000397101 AVPP01185 164 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 HPXP02790 462 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 UBCP0CG48 685 aaKnown RBP11.57□□□□□ -0.56
SEC13-205ENST00000397101 COL8A2P25067 703 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 GLRXP35754 106 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 LIPAP38571 399 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 WNT5AP41221 380 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 UCP2P55851 309 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 UBA52P62987 128 aaKnown RBP11.57□□□□□ -0.56
SEC13-205ENST00000397101 GPR50Q13585 617 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 TPBGQ13641 420 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 DOC2BQ14184 412 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 TUSC1Q2TAM9 212 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 KRTAP27-1Q3LI81 207 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 DMKNQ6E0U4 476 aaPredicted RBP11.57□□□□□ -0.56
SEC13-205ENST00000397101 TREML4Q6UXN2 200 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 MRPL21Q7Z2W9 205 aaKnown RBP11.57□□□□□ -0.56
SEC13-205ENST00000397101 RDH10Q8IZV5 341 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 OR51E1Q8TCB6 317 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 REEP6Q96HR9 211 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 FAM71F1Q96KD3 344 aaPredicted RBP11.57□□□□□ -0.56
SEC13-205ENST00000397101 C1QTNF5Q9BXJ0 243 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 MRPL37Q9BZE1 423 aaKnown RBP11.57□□□□□ -0.56
SEC13-205ENST00000397101 BCL2L14Q9BZR8 327 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 LPAR2Q9HBW0 351 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 EXOSC4Q9NPD3 245 aaKnown RBP11.57□□□□□ -0.56
SEC13-205ENST00000397101 ESM1Q9NQ30 184 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 TBCCD1Q9NVR7 557 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 ZNF281Q9Y2X9 895 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 STARD10Q9Y365 291 aa11.57□□□□□ -0.56
SEC13-205ENST00000397101 LOC105371242A0A075B767 164 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 A0A0G2JMP0 313 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 A0A0X1KG70 313 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 CCDC160A6NGH7 325 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 OR4C45A6NMZ5 311 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 NOL3O60936 208 aaKnown RBP11.56□□□□□ -0.56
SEC13-205ENST00000397101 RGS9O75916 674 aaPredicted RBP11.56□□□□□ -0.56
SEC13-205ENST00000397101 ZFPL1O95159 310 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 SERPINA3P01011 423 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 NGFP01138 241 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 TTRP02766 147 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 ZNF35P13682 527 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 GATA3P23771 443 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 PSMA1P25786 263 aaKnown RBP11.56□□□□□ -0.56
SEC13-205ENST00000397101 GCH1P30793 250 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 ALDH3B2P48448 385 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 PPP1CBP62140 327 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 RPS25P62851 125 aaKnown RBP11.56□□□□□ -0.56
SEC13-205ENST00000397101 BLMHQ13867 455 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 TRAM1Q15629 374 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 GLYATL3Q5SZD4 288 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 SPATA46Q5T0L3 261 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 SATL1Q86VE3 508 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 MS4A15Q8N5U1 240 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 OR4M2Q8NGB6 313 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 OR2AE1Q8NHA4 323 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 NANPQ8TBE9 248 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 SGK3Q96BR1 496 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 TMPRSS13Q9BYE2 586 aa11.56□□□□□ -0.56
SEC13-205ENST00000397101 GPR84Q9NQS5 396 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms