RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 FBXL14Q8N1E6 418 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 FAM109AQ8N4B1 249 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 DEDD2Q8WXF8 326 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 ARHGAP5-AS1Q96IT6 56 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 ZNF224Q9NZL3 707 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 LIPGQ9Y5X9 500 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 ADAM10O14672 748 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 XRCC3O43542 346 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 RPA2P15927 270 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 CPT2P23786 658 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 RPS11P62280 158 aaKnown RBP eCLIP13.36□□□□□ -0.27
MCF2L-205ENST00000397017 C19orf48Q6RUI8 117 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 PCDHB16Q9NRJ7 776 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 CBX5P45973 191 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 MMP16P51512 607 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 GSG1Q2KHT4 349 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 C6orf201Q7Z4U5 140 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 OR5L1Q8NGL2 311 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 SDHCQ99643 169 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-205ENST00000397017 TMEM38BQ9NVV0 291 aa13.36□□□□□ -0.27
MCF2L-205ENST00000397017 OR6C6A6NF89 314 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 SOCS1O15524 211 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 GNRHRP30968 328 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 SMCO1Q147U7 214 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 NXF2Q9GZY0 626 aaKnown RBP13.35□□□□□ -0.27
MCF2L-205ENST00000397017 MOB1AQ9H8S9 216 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 PYCARD-AS1I3L0S3 204 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 GLSO94925 669 aaPredicted RBP13.35□□□□□ -0.27
MCF2L-205ENST00000397017 GALP22466 123 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 PRKACBP22694 351 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 CA6P23280 308 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 PSG4Q00888 419 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 SNAI3Q3KNW1 292 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 LYPD8Q6UX82 237 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 STEAP2Q8NFT2 490 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 ST7LQ8TDW4 575 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 NEURL1O76050 574 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 LPLP06858 475 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 MMP15P51511 669 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 SLC25A47Q6Q0C1 308 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 TMEM104Q8NE00 496 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 THAP6Q8TBB0 222 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 FBXO17Q96EF6 278 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 PPA2Q9H2U2 334 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 DNAJB11Q9UBS4 358 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 ST3GAL6Q9Y274 331 aa13.35□□□□□ -0.27
MCF2L-205ENST00000397017 PLSCR5A0PG75 271 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 NAP1L6A6NFF2 107 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 DHRS3O75911 302 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 TSPAN9O75954 239 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 GABRA2P47869 451 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-205ENST00000397017 RAB35Q15286 201 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 TBC1D28Q2M2D7 210 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 MOGAT2Q3SYC2 334 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 PHLDA2Q53GA4 152 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 NUFIP2Q7Z417 695 aaKnown RBP13.34□□□□□ -0.27
MCF2L-205ENST00000397017 DEFB108BQ8NET1 73 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 PLPPR2Q96GM1 343 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 ZNF471Q9BX82 626 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-205ENST00000397017 ZNF732B4DXR9 585 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 M0R233 179 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 BCL2A1Q16548 175 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 ZNF485Q8NCK3 441 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 OR1J1Q8NGS3 322 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 ZNF649Q9BS31 505 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 TMPRSS13Q9BYE2 586 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 SLC5A7Q9GZV3 580 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 PTPRQQ9UMZ3 2332 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 ACACBO00763 2458 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 TDGF1P13385 188 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 PRKACAP17612 351 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 ZNF83P51522 516 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 FAM219AQ8IW50 185 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 INO80EQ8NBZ0 244 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-205ENST00000397017 OR4D10Q8NGI6 311 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 DDOQ99489 341 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 POFUT1Q9H488 388 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 KIAA2026Q5HYC2 2103 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 WNK2Q9Y3S1 2297 aa13.34□□□□□ -0.27
MCF2L-205ENST00000397017 TRGV8A0A0C4DH27 118 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 M0R1B8 84 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 NXPH2O95156 264 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 S100GP29377 79 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 PTGS2P35354 604 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 PTGFRP43088 359 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 SORDQ00796 357 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 SF3B4Q15427 424 aaKnown RBP eCLIP13.33□□□□□ -0.271e-9■■□□□ 13.7
MCF2L-205ENST00000397017 DRAM2Q6UX65 266 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 C12orf45Q8N5I9 185 aaPredicted RBP13.33□□□□□ -0.27
MCF2L-205ENST00000397017 FADS6Q8N9I5 356 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 COQ8AQ8NI60 647 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 SECTM1Q8WVN6 248 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 PSMF1Q92530 271 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 DYRK2Q92630 601 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 TRIM63Q969Q1 353 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 SLAMF9Q96A28 289 aa13.33□□□□□ -0.27
MCF2L-205ENST00000397017 ZNF552Q9H707 407 aaPredicted RBP13.33□□□□□ -0.27
MCF2L-205ENST00000397017 J3QRE1 110 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 HRGP04196 525 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms