RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 R4GMQ9 66 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 LOC100509620A0A075B734 347 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 A6NHS1 94 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 ACOD1A6NK06 481 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 TMEM212A6NML5 194 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 F5H5K5 113 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 PNPP00491 289 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 SERPINA3P01011 423 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 HLA-DPB1P04440 258 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 ANXA2P07355 339 aaKnown RBP8.74□□□□□ -1.01
NEDD8-202ENST00000396828 CCNOP22674 350 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 APLNRP35414 380 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 TGFBR2P37173 567 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 MPV17P39210 176 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 SLC6A9P48067 706 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 CCR9P51686 369 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 PRKXP51817 358 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 TMBIM6P55061 237 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 TPTEP56180 551 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 SLC3A1Q07837 685 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 SSX1Q16384 188 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 BCL2L15Q5TBC7 163 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 DRAM2Q6UX65 266 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 PEG10Q86TG7 708 aaKnown RBP8.74□□□□□ -1.01
NEDD8-202ENST00000396828 ANKRD13BQ86YJ7 626 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 MS4A15Q8N5U1 240 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF676Q8N7Q3 588 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 OR1J1Q8NGS3 322 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 OR2G2Q8NGZ5 317 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 OR5AK2Q8NH90 309 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 RAB2BQ8WUD1 216 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 GHSRQ92847 366 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 DGCR14Q96DF8 476 aaKnown RBP8.74□□□□□ -1.01
NEDD8-202ENST00000396828 TMED9Q9BVK6 235 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 CDH20Q9HBT6 801 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 ESM1Q9NQ30 184 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 DCAF16Q9NXF7 216 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 FRRS1LQ9P0K9 344 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 RSL24D1Q9UHA3 163 aaKnown RBP8.74□□□□□ -1.01
NEDD8-202ENST00000396828 OR52A1Q9UKL2 312 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 PCDHB10Q9UN67 800 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 STUB1Q9UNE7 303 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF281Q9Y2X9 895 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 WIPI2Q9Y4P8 454 aa8.74□□□□□ -1.01
NEDD8-202ENST00000396828 TRAV20A0A0B4J274 112 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 IGHV1-69-2A0A0G2JMI3 117 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 ZSCAN5BA6NJL1 495 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 H3BSA7 217 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF701M0R085 212 aaPredicted RBP8.73□□□□□ -1.01
NEDD8-202ENST00000396828 M0R135 149 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 WIPF1O43516 503 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 AIREO43918 545 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 SRSF10O75494 262 aaKnown RBP8.73□□□□□ -1.01
NEDD8-202ENST00000396828 IGHV1-46P01743 117 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 IGHV3-13P01766 116 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 IGHV2-5P01817 119 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 UBCP0CG48 685 aaKnown RBP8.73□□□□□ -1.01
NEDD8-202ENST00000396828 EGR1P18146 543 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 EPHA1P21709 976 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 GALP22466 123 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 GADD45AP24522 165 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 STOMP27105 288 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 RAD52P43351 418 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 MMP15P51511 669 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF121P58317 390 aaPredicted RBP8.73□□□□□ -1.01
NEDD8-202ENST00000396828 HILS1P60008 231 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 NANOS3P60323 173 aaKnown RBP8.73□□□□□ -1.01
NEDD8-202ENST00000396828 MFGE8Q08431 387 aaPredicted RBP8.73□□□□□ -1.01
NEDD8-202ENST00000396828 DOC2BQ14184 412 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 TBC1D28Q2M2D7 210 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 YIF1BQ5BJH7 314 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 WDR38Q5JTN6 314 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 GDPGP1Q6ZNW5 385 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 CATSPERDQ86XM0 798 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 PRSS35Q8N3Z0 413 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 OR1J2Q8NGS2 313 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 C22orf15Q8WYQ4 148 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 THRSPQ92748 146 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 TMEM203Q969S6 136 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF799Q96GE5 643 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 MARS2Q96GW9 593 aaKnown RBP8.73□□□□□ -1.01
NEDD8-202ENST00000396828 POM121L2Q96KW2 1035 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 C4orf45Q96LM5 186 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 DCLRE1CQ96SD1 692 aaKnown RBP8.73□□□□□ -1.01
NEDD8-202ENST00000396828 SLC6A7Q99884 636 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 BCL7BQ9BQE9 202 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 BRD7Q9NPI1 651 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 FAM206AQ9NX38 181 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 OPN4Q9UHM6 478 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 ENPP5Q9UJA9 477 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 SSR3Q9UNL2 185 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 SIRT4Q9Y6E7 314 aaPredicted RBP8.73□□□□□ -1.01
NEDD8-202ENST00000396828 CEPT1Q9Y6K0 416 aa8.73□□□□□ -1.01
NEDD8-202ENST00000396828 A0A0A6YYJ9 748 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 LOC100506127A0A0U1RQW1 187 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 TMEM89A2RUT3 159 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 C5orf49A4QMS7 147 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 OR4C45A6NMZ5 311 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 SPRY3O43610 288 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 ZFPL1O95159 310 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms