RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ELL3Q9HB65 397 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-202ENST00000393773 NECAP2Q9NVZ3 263 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 ZNF391Q9UJN7 358 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 RHBDD3Q9Y3P4 386 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 A0A1W2PQ09 198 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 ANXA2P07355 339 aaKnown RBP12.49□□□□□ -0.41
CHMP3-202ENST00000393773 PAX6P26367 422 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 RRM2P31350 389 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 GSK3AP49840 483 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 LOXL3P58215 753 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 TAF13Q15543 124 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 AANATQ16613 207 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 TEX30Q5JUR7 227 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 HDXQ7Z353 690 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 ZNF511Q8NB15 262 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 OR52L1Q8NGH7 329 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 GNPDA2Q8TDQ7 276 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 HPSE2Q8WWQ2 592 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 PHF21AQ96BD5 680 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 DUS3LQ96G46 650 aaKnown RBP12.49□□□□□ -0.41
CHMP3-202ENST00000393773 CLPTM1LQ96KA5 538 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 MEGF9Q9H1U4 602 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 EFCAB1Q9HAE3 211 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 RAB18Q9NP72 206 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 ZNF319Q9P2F9 582 aa12.49□□□□□ -0.41
CHMP3-202ENST00000393773 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 ZNF593O00488 134 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-202ENST00000393773 GYPBP06028 91 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 ACAA1P09110 424 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-202ENST00000393773 VSIG10L2P0DP72 767 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 SPI1P17947 270 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 ACKR3P25106 362 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 FMO3P31513 532 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 DCTDP32321 178 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 GNALP38405 381 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 IFNGR2P38484 337 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 PSME3P61289 254 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 IL5RAQ01344 420 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 CRMP1Q14194 572 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 GFOD2Q3B7J2 385 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 RPL13AP3Q6NVV1 102 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 FAM57BQ71RH2 274 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 CSNK2A3Q8NEV1 391 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 PIFOQ8TCI5 191 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-202ENST00000393773 RPL3LQ92901 407 aaKnown RBP12.48□□□□□ -0.41
CHMP3-202ENST00000393773 MED30Q96HR3 178 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 MICU1Q9BPX6 476 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 BTBD10Q9BSF8 475 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 RTL8AQ9BWD3 113 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 NPFFR1Q9GZQ6 430 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 MMP28Q9H239 520 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 GORASP2Q9H8Y8 452 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 ZNF702PQ9H963 129 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 SPAG4Q9NPE6 437 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 SERTAD4Q9NUC0 356 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 ZNF222Q9UK12 451 aa12.48□□□□□ -0.41
CHMP3-202ENST00000393773 IGKV1D-17A0A075B6S4 117 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 TMEM210A6NLX4 147 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 AKR7A2O43488 359 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 ANGPTL7O43827 346 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 XPNPEP2O43895 674 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 FBXO24O75426 580 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 SASH3O75995 380 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 CLUP10909 449 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 NDUFB7P17568 137 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 CFL1P23528 166 aaKnown RBP12.47□□□□□ -0.41
CHMP3-202ENST00000393773 HSD11B1P28845 292 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-202ENST00000393773 PRDX4Q13162 271 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 LINC01590Q5TEZ4 76 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 LIAT1Q6ZQX7 453 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 RNF148Q8N7C7 305 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 OR9Q2Q8NGE9 314 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 OR52H1Q8NGJ2 320 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 OR5D13Q8NGL4 314 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 RNF133Q8WVZ7 376 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 OR5P3Q8WZ94 311 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 PYURFQ96I23 114 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 AMELYQ99218 206 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 FAM234AQ9H0X4 552 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 IL20Q9NYY1 176 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 DNAJC27Q9NZQ0 273 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 NLKQ9UBE8 527 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 SF3B6Q9Y3B4 125 aaKnown RBP12.47□□□□□ -0.41
CHMP3-202ENST00000393773 MPC1Q9Y5U8 109 aa12.47□□□□□ -0.41
CHMP3-202ENST00000393773 TRBV23-1A0A0A0MS06 115 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 ANXA2P2A6NMY6 339 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 OR2AT4A6NND4 320 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 FABP3P05413 133 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 CD28P10747 220 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 SLC15A1P46059 708 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 BMXP51813 675 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 SLC25A1P53007 311 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 BLMHQ13867 455 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 EIF2B1Q14232 305 aaKnown RBP12.46□□□□□ -0.41
CHMP3-202ENST00000393773 HABP2Q14520 560 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-202ENST00000393773 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 FAM76BQ5HYJ3 339 aa12.46□□□□□ -0.41
CHMP3-202ENST00000393773 Q8N2B8 174 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms