RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 WASF3Q9UPY6 502 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 NRG2O14511 850 aaPredicted RBP12.75□□□□□ -0.37
RTF1-201ENST00000389629 SLC25A4P12235 298 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 ID4P47928 161 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 HNRNPKP61978 463 aaKnown RBP eCLIP12.75□□□□□ -0.37
RTF1-201ENST00000389629 TMEM196Q5HYL7 178 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 C1QL3Q5VWW1 255 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 CDC20BQ86Y33 519 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 GSN-AS1Q9NRJ2 163 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 GATCO43716 136 aaKnown RBP12.75□□□□□ -0.37
RTF1-201ENST00000389629 H3F3AP84243 136 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 CNN3Q15417 329 aaKnown RBP12.75□□□□□ -0.37
RTF1-201ENST00000389629 TMEM37Q8WXS4 190 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 GPR173Q9NS66 373 aa12.75□□□□□ -0.37
RTF1-201ENST00000389629 KLF4O43474 513 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 ZIC2O95409 532 aaPredicted RBP12.74□□□□□ -0.37
RTF1-201ENST00000389629 ALX4Q9H161 411 aaPredicted RBP12.74□□□□□ -0.37
RTF1-201ENST00000389629 RCL1Q9Y2P8 373 aaKnown RBP12.74□□□□□ -0.37
RTF1-201ENST00000389629 ZSWIM8A7E2V4 1837 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 CTLA4P16410 223 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 FGF7P21781 194 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 FPR2P25090 351 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 ZNF141Q15928 474 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 ZNF485Q8NCK3 441 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 OR51H1Q8NH63 302 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 HINT2Q9BX68 163 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 TRBV11-1A0A0K0K1C0 115 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 MFNGO00587 321 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 HSD17B6O14756 317 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 CD226Q15762 336 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 ANKRD9Q96BM1 317 aaPredicted RBP12.74□□□□□ -0.37
RTF1-201ENST00000389629 SUSD2Q9UGT4 822 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 TCAPO15273 167 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 ONECUT2O95948 504 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 F10P00742 488 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 NGFRP08138 427 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 DRD1P21728 446 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 HTD2P86397 168 aa12.74□□□□□ -0.37
RTF1-201ENST00000389629 SPINT1O43278 529 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 FAM157BP0CG42 384 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 ADRA2CP18825 462 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 PAX6P26367 422 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 VEGFBP49765 207 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 OR8G2PQ6IF36 304 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 COMMD1Q8N668 190 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 OR8U1Q8NH10 309 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 SLC25A28Q96A46 364 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 ULBP2Q9BZM5 246 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 OR5AC2Q9NZP5 309 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 WDR90Q96KV7 1748 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 CCDC187A0A096LP49 1063 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 CDRT15L2A8MXV6 281 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 SEC14L6B5MCN3 397 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 CALCRP30988 508 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 ECI1P42126 302 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 C17orf67Q0P5P2 114 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 BAGE3Q86Y29 109 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 BAGE2Q86Y30 109 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 ZNF611Q8N823 705 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 FAM210BQ96KR6 192 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 KLK13Q9UKR3 277 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 DTX4Q9Y2E6 619 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 ZNF205O95201 554 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 IL33O95760 270 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 HIST1H1DP16402 221 aaKnown RBP12.73□□□□□ -0.37
RTF1-201ENST00000389629 ZNF117Q03924 483 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 RNF151Q2KHN1 245 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 SMIM7Q9BQ49 75 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 NAA11Q9BSU3 229 aaPredicted RBP12.73□□□□□ -0.37
RTF1-201ENST00000389629 OR51B6Q9H340 312 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 FAM60AQ9NP50 221 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 MMACHCQ9Y4U1 282 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 EP400Q96L91 3159 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 NSG1A0A0A6YYJ2 146 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 AADACL3Q5VUY0 350 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 SNX22Q96L94 193 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 NMES1Q9C002 83 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 DNAJB11Q9UBS4 358 aa12.73□□□□□ -0.37
RTF1-201ENST00000389629 TMEM184BQ9Y519 407 aaPredicted RBP12.73□□□□□ -0.37
RTF1-201ENST00000389629 A0A1W2PPV4 95 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 CYR61O00622 381 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 TGOLN2O43493 480 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 GUSBP08236 651 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 GGTLC2Q14390 218 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 ZNF66Q6ZN08 573 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 ICAM5Q9UMF0 924 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 CBY1Q9Y3M2 126 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 NPTNQ9Y639 398 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 IGKV1D-16P01601 117 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 IL9P15248 144 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 HAAOP46952 286 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 EFNB1P98172 346 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 DGAT2L6Q6ZPD8 337 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 Q7L0L9 218 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 DOK3Q7L591 496 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 WDR5BQ86VZ2 330 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 GNPNAT1Q96EK6 184 aaPredicted RBP12.72□□□□□ -0.37
RTF1-201ENST00000389629 REEP6Q96HR9 211 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 AP1S3Q96PC3 154 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 GDF15Q99988 308 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms