RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 OR56B2PQ8NGI1 322 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 ROBO4Q8WZ75 1007 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 A0A1W2PPE2 198 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 RER1O15258 196 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF205O95201 554 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 VEGFBP49765 207 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 C16orf47Q6ZP98 133 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNRF4Q8WWF5 429 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 FRG2CA6NGY1 282 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 AP4M1O00189 453 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 SERPINA7P05543 415 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 PDCD1Q15116 288 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 AADACL3Q5VUY0 350 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 GGNBP1Q5YKI7 109 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 SFTPA2Q8IWL1 248 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 C20orf196Q8IYI0 205 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 UBAC2Q8NBM4 344 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF485Q8NCK3 441 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 SLC35B3Q9H1N7 401 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 GHRLQ9UBU3 117 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 GVINP1Q7Z2Y8 2422 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 MPGP29372 298 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR1D5P58170 312 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 SLC35A1P78382 337 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 SRPXP78539 464 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 PLGLB1Q02325 96 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 MICBQ29980 383 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 THEM4Q5T1C6 240 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 SLC16A14Q7RTX9 510 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 C6orf201Q7Z4U5 140 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF845Q96IR2 970 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 CABLES2Q9BTV7 478 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 HINT2Q9BX68 163 aa11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 RCL1Q9Y2P8 373 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-201ENST00000389328 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 GPR37O15354 613 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 CT45A8P0DMV1 189 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 CT45A9P0DMV2 189 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 CD79AP11912 226 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 CT45A2Q5DJT8 189 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 CST9LP1Q5W188 147 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 MOB1AQ9H8S9 216 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 NPTNQ9Y639 398 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 RTTNQ86VV8 2226 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 MGAMO43451 1857 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 EFNB1P98172 346 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 FOXF1Q12946 379 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 FAHD2BQ6P2I3 314 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 BRICD5Q6PL45 260 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 DPPA2Q7Z7J5 298 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF610Q8N9Z0 462 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 FAHD2AQ96GK7 314 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 NMES1Q9C002 83 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 C8orf33Q9H7E9 229 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 DNAJB11Q9UBS4 358 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 SRPK3Q9UPE1 567 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 WASF3Q9UPY6 502 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 A0A087WV48 116 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 M0R135 149 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 DNASE2O00115 360 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 CD1AP06126 327 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 CSNK1EP49674 416 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 PNLIPRP3Q17RR3 467 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 ISXQ2M1V0 245 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 THNSL2Q86YJ6 484 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF799Q96GE5 643 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 SUCNR1Q9BXA5 334 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 BCO1Q9HAY6 547 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 TRBV5-5A0A0J9YX44 114 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 SPINT1O43278 529 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 SPRY1O43609 319 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 ONECUT2O95948 504 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 PNPP00491 289 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 P04436 131 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 CELA2BP08218 269 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 VSIG8P0DPA2 414 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 RAB5AP20339 215 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 GSK3AP49840 483 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 RPS11P62280 158 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 MRPS21P82921 87 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF684Q5T5D7 378 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 PSMF1Q92530 271 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 FGF14Q92915 247 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 PATZ1Q9HBE1 687 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
TRAPPC9-201ENST00000389328 CHD5Q8TDI0 1954 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 TET1Q8NFU7 2136 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 FIGNL2A6NMB9 653 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF727A8MUV8 499 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 TRAPPC2LH3BP13 241 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 HLA-HP01893 362 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 HOXC12P31275 282 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 KISS1Q15726 138 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF705AQ6ZN79 300 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 SLC36A1Q7Z2H8 476 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF429Q86V71 674 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 RPP25Q9BUL9 199 aaKnown RBP11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 AICDAQ9GZX7 198 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 OBP2AQ9NY56 170 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 CA14Q9ULX7 337 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms