RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 IGKV1D-42A0A075B6H8 117 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 IGLV3-9A0A075B6K5 115 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 C15orf38-AP3S2A0A0A6YYH1 394 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 IGHV3OR16-9A0A0B4J2B5 98 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 CCL15-CCL14A0A0B4J2E2 113 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 A0A0G2JMP0 313 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 A0A0X1KG70 313 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 A0A1W2PPV9 198 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 TMEM72A0PK05 275 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 KRT87PA6NCN2 255 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 LYRM9A8MSI8 78 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 C17orf98A8MV24 154 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 A8MWP4 228 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 RTEL1-TNFRSF6BF6WH68 1400 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 H3BMM0 161 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 KLRC4-KLRK1H3BQV0 150 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 K7ERS5 55 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 RAD1O60671 282 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 FLOT1O75955 427 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 DIRAS3O95661 229 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 TMEM50AO95807 157 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 OPN1SWP03999 348 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 CDK1P06493 297 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 PTHLHP12272 177 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 NCF1P14598 390 aaPredicted RBP-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 MSR1P21757 451 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 MYL9P24844 172 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 IL3RAP26951 378 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 PSMB9P28065 219 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 NSG1P42857 185 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 MAGEA1P43355 309 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 CCNHP51946 323 aaPredicted RBP-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 KCNJ2P63252 427 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 SEMG2Q02383 582 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 COL7A1Q02388 2944 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 GK3PQ14409 553 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 PTPRKQ15262 1439 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 MAPRE2Q15555 327 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 TNXAQ16473 311 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 PDK4Q16654 411 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 CCL15Q16663 113 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 C6orf99Q4VX62 202 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 SPIN4Q56A73 249 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 LRRC66Q68CR7 880 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 KDELC1Q6UW63 502 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 MBOAT2Q6ZWT7 520 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 LYZL2Q7Z4W2 148 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 AMN1Q8IY45 258 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 HDDC3Q8N4P3 179 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 RNF10Q8N5U6 811 aaKnown RBP-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 ZDHHC22Q8N966 263 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 WDR31Q8NA23 367 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 SDR9C7Q8NEX9 313 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 OR1L4Q8NGR5 311 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 OR4X1Q8NH49 305 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 RAB3IL1Q8TBN0 382 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 MGARPQ8TDB4 240 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 UBE2WQ96B02 151 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 ECHDC3Q96DC8 303 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 CCDC126Q96EE4 140 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 NRBF2Q96F24 287 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 SNF8Q96H20 258 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 BTN2A3PQ96KV6 586 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 ALS2CR12Q96Q35 445 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 GPR22Q99680 433 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 PITX2Q99697 317 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 ATP5SQ99766 215 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 GABARAPL1Q9H0R8 117 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 CYSTM1Q9H1C7 97 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 RHOFQ9HBH0 211 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 SND1-IT1Q9HBX3 110 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 RGS18Q9NS28 235 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 ETNK2Q9NVF9 386 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 RBFOX1Q9NWB1 397 aaKnown RBP-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 LGALS13Q9UHV8 139 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 KLF13Q9Y2Y9 288 aaPredicted RBP-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 KLK5Q9Y337 293 aaPredicted RBP-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 MRPS16Q9Y3D3 137 aaKnown RBP-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 KIF3AQ9Y496 699 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 PEX16Q9Y5Y5 336 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 U3KQV3 271 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 MYOFQ9NZM1 2061 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 CLUHO75153 1309 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 PTPRZ1P23471 2315 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ARFGEF3Q5TH69 2177 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 TRAV26-1A0A087WT03 109 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 A0A0A6YYD5 115 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 A0A0J9YX75 114 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 A0A0J9YYE9 177 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 A0A1W2PRG6 482 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 FAM170AA1A519 330 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 A6NED7 52 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ARRDC5A6NEK1 342 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 NCBP2LA6PVI3 153 aaKnown RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ISLRO14498 428 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 RGS5O15539 181 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 RAD51CO43502 376 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 TIMM8AO60220 97 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 SEC22BO75396 215 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms