RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 MS4A15Q8N5U1 240 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 CELF2-AS1Q8N7Q2 184 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 OR13C3Q8NGS6 347 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 UBASH3BQ8TF42 649 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 FCGR1BQ92637 280 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 UFD1Q92890 307 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 DVL3Q92997 716 aaPredicted RBP13.11□□□□□ -0.31
PDGFB-202ENST00000381551 FOXC2Q99958 501 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 ADAT1Q9BUB4 502 aaKnown RBP13.11□□□□□ -0.31
PDGFB-202ENST00000381551 CXXC4Q9H2H0 198 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 PLEKHA1Q9HB21 404 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 BARX1Q9HBU1 254 aaPredicted RBP13.11□□□□□ -0.31
PDGFB-202ENST00000381551 ABCB9Q9NP78 766 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 DHDHQ9UQ10 334 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 TRBV5-5A0A0J9YX44 114 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 ANKRD61A6NGH8 418 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 TRIM64CA6NLI5 447 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 ANXA2P2A6NMY6 339 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 TPD52L2O43399 206 aaKnown RBP13.1□□□□□ -0.31
PDGFB-202ENST00000381551 SSX4O60224 188 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 INMTO95050 263 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 PTBP3O95758 552 aaKnown RBP13.1□□□□□ -0.31
PDGFB-202ENST00000381551 SERPINA3P01011 423 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 DAOP14920 347 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 TNFRSF1AP19438 455 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 CRYBB2P43320 205 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 SRP9P49458 86 aaKnown RBP13.1□□□□□ -0.31
PDGFB-202ENST00000381551 MRPS11P82912 194 aaKnown RBP13.1□□□□□ -0.31
PDGFB-202ENST00000381551 TESK1Q15569 626 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 UBE2V2Q15819 145 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 KCTD8Q6ZWB6 473 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 PHC2Q8IXK0 858 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 ZDHHC23Q8IYP9 409 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 PARP16Q8N5Y8 322 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 OR5A2Q8NGI9 324 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 OR13C5Q8NGS8 318 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 OR8S1Q8NH09 359 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 TSEN15Q8WW01 171 aaKnown RBP13.1□□□□□ -0.31
PDGFB-202ENST00000381551 ITLN1Q8WWA0 313 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 HPSE2Q8WWQ2 592 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 PP6455Q8WZ26 134 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 MEGF10Q96KG7 1140 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 HIST1H2AAQ96QV6 131 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 CHST5Q9GZS9 411 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 FGF23Q9GZV9 251 aaPredicted RBP13.1□□□□□ -0.31
PDGFB-202ENST00000381551 SAP30LQ9HAJ7 183 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 GPR173Q9NS66 373 aa13.1□□□□□ -0.31
PDGFB-202ENST00000381551 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.09□□□□□ -0.31
PDGFB-202ENST00000381551 LYNX1G3V0Z9 82 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 OCM2P0CE71 109 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 LYNX1P0DP58 116 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 ZNF20P17024 532 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 THBS2P35442 1172 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 GATA4P43694 442 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 SOX2P48431 317 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 MZT1Q08AG7 82 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 CHD3Q12873 2000 aaKnown RBP13.09□□□□□ -0.31
PDGFB-202ENST00000381551 Q499Y3 187 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 FAM76BQ5HYJ3 339 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 DMRTC1Q5HYR2 192 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 CEP78Q5JTW2 689 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 SYT6Q5T7P8 510 aaPredicted RBP13.09□□□□□ -0.31
PDGFB-202ENST00000381551 SERPINA12Q8IW75 414 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 RDH5Q92781 318 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 RNF170Q96K19 258 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 MICU1Q9BPX6 476 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 GCM1Q9NP62 436 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 C14orf119Q9NWQ9 140 aa13.09□□□□□ -0.31
PDGFB-202ENST00000381551 SF3B6Q9Y3B4 125 aaKnown RBP13.09□□□□□ -0.31
PDGFB-202ENST00000381551 IGHV3-64DA0A0J9YX35 117 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 ZNF879B4DU55 563 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 CDC14BO60729 498 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 MPPED2Q15777 294 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 NEDD8Q15843 81 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 SSX1Q16384 188 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 PLCXD3Q63HM9 321 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 ASPHD2Q6ICH7 369 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 PRSS57Q6UWY2 283 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 UNQ9370/PRO34162Q6UXP9 181 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 DNM1P46Q6ZS02 220 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 UTS2BQ765I0 119 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 WDR86Q86TI4 376 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 C11orf53Q8IXP5 236 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 OR1M1Q8NGA1 313 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 OR5D14Q8NGL3 314 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 YIPF5Q969M3 257 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 TMEM203Q969S6 136 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 TMEM106AQ96A25 262 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 TECTBQ96PL2 329 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 TMED9Q9BVK6 235 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 RTL8AQ9BWD3 113 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 ZCCHC4Q9H5U6 513 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 DLL4Q9NR61 685 aa13.08□□□□□ -0.32
PDGFB-202ENST00000381551 TRBV5-7A0A0A0MS05 114 aa13.07□□□□□ -0.32
PDGFB-202ENST00000381551 IGKV1-9A0A0C4DH69 117 aa13.07□□□□□ -0.32
PDGFB-202ENST00000381551 IGHV1-69-2A0A0G2JMI3 117 aa13.07□□□□□ -0.32
PDGFB-202ENST00000381551 OR5B21A6NL26 309 aa13.07□□□□□ -0.32
PDGFB-202ENST00000381551 ZNF732B4DXR9 585 aa13.07□□□□□ -0.32
PDGFB-202ENST00000381551 SC5DO75845 299 aa13.07□□□□□ -0.32
PDGFB-202ENST00000381551 GATBO75879 557 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms