RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 FAM3DQ96BQ1 224 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 PCNX2A6NKB5 2137 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 GJE1A6NN92 205 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 SNAPC5O75971 98 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 VAMP5O95183 116 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 HTR3BO95264 441 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 FSTP19883 344 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 ITGA3P26006 1051 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 SUCLG1P53597 346 aaKnown RBP12.56□□□□□ -0.4
CLCN4-201ENST00000380829 C2orf76Q3KRA6 126 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 GLYATL3Q5SZD4 288 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 BIVMQ86UB2 503 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 GGNQ86UU5 652 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 ZIC4Q8N9L1 334 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 SIGLEC12Q96PQ1 595 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 PAPOLGQ9BWT3 736 aaKnown RBP12.56□□□□□ -0.4
CLCN4-201ENST00000380829 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
CLCN4-201ENST00000380829 HES7Q9BYE0 225 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 OR51M1Q9H341 326 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 TXNL1O43396 289 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 TRIP6Q15654 476 aaKnown RBP12.55□□□□□ -0.4
CLCN4-201ENST00000380829 TSC22D1Q15714 1073 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 DCAF10Q5QP82 559 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 GLT8D1Q68CQ7 371 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 RAB12Q6IQ22 244 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 JMJD6Q6NYC1 403 aaPredicted RBP12.55□□□□□ -0.4
CLCN4-201ENST00000380829 TMEM123Q8N131 208 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 FGGYQ96C11 551 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 GAL3ST1Q99999 423 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 UTP23Q9BRU9 249 aaKnown RBP12.55□□□□□ -0.4
CLCN4-201ENST00000380829 CHST6Q9GZX3 395 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 PNRC2Q9NPJ4 139 aaKnown RBP12.55□□□□□ -0.4
CLCN4-201ENST00000380829 CDV3Q9UKY7 258 aaKnown RBP12.55□□□□□ -0.4
CLCN4-201ENST00000380829 KMT2EQ8IZD2 1858 aa12.55□□□□□ -0.4
CLCN4-201ENST00000380829 KANTRA0A1W2PQU2 76 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 RFPL4AA6NLU0 287 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 RFPL4AL1F8VTS6 287 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 SYT7O43581 403 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 GATCO43716 136 aaKnown RBP12.54□□□□□ -0.4
CLCN4-201ENST00000380829 GNALP38405 381 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 CARD18P57730 90 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 RAC3P60763 192 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 PLEKHN1Q494U1 663 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-201ENST00000380829 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 ABHD17BQ5VST6 288 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 FAM166AQ6J272 317 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 LRRC18Q8N456 261 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 JAGN1Q8N5M9 183 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 SUMF1Q8NBK3 374 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 OR51E1Q8TCB6 317 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 ROBO4Q8WZ75 1007 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 TMEM54Q969K7 222 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 CPNE2Q96FN4 548 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-201ENST00000380829 SOX7Q9BT81 388 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 RBM24Q9BX46 236 aaKnown RBP12.54□□□□□ -0.4
CLCN4-201ENST00000380829 ZNF629Q9UEG4 869 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-201ENST00000380829 PCDHGA1Q9Y5H4 931 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 LOC100289279A0A1B0GTE1 492 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 A0A1W2PPE3 182 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 MEIS3P1A6NDR6 274 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 CXCL13O43927 109 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 CTAG2O75638 210 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 NEURL1O76050 574 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 CFPP27918 469 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 HTR2CP28335 458 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 MECP2P51608 486 aaKnown RBP12.54□□□□□ -0.4
CLCN4-201ENST00000380829 ZNF121P58317 390 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-201ENST00000380829 FOXO1Q12778 655 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 ECH1Q13011 328 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 KCNMB1Q16558 191 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 C4orf46Q504U0 113 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 LINC00696Q6ZRV3 163 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 OR4C16Q8NGL9 310 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 ADAMTS17Q8TE56 1095 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 KCNE4Q8WWG9 221 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 ZNF837Q96EG3 531 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-201ENST00000380829 ADAT3Q96EY9 351 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-201ENST00000380829 PLA2G3Q9NZ20 509 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 DMXL1Q9Y485 3027 aa12.54□□□□□ -0.4
CLCN4-201ENST00000380829 KIAA1549Q9HCM3 1950 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 STMND1H3BQB6 276 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 KCNAB3O43448 404 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 GLSO94925 669 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-201ENST00000380829 S100A8P05109 93 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 RNF224P0DH78 156 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 GUCA1AP43080 201 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-201ENST00000380829 PPT1P50897 306 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 SCAND1P57086 179 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 GFOD2Q3B7J2 385 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 PCGF3Q3KNV8 242 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 AKIRIN2Q53H80 203 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 UQCC3Q6UW78 93 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 COMMD2Q86X83 199 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 IL22RA1Q8N6P7 574 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 OR1J2Q8NGS2 313 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 OR10D3Q8NH80 312 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 VRK1Q99986 396 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-201ENST00000380829 ZNF319Q9P2F9 582 aa12.53□□□□□ -0.4
CLCN4-201ENST00000380829 ASPMQ8IZT6 3477 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms